RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OSBPL10Q9BXB5 764 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 EPB41L4BQ9H329 900 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 AGO3Q9H9G7 860 aaKnown RBP11.55□□□□□ -0.56
NOD1-201ENST00000222823 KLHL3Q9UH77 587 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 PLLPQ9Y342 182 aa11.55□□□□□ -0.56
NOD1-201ENST00000222823 A0A088AWK7 358 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TRIM38O00635 465 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TRAFD1O14545 582 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 ELNP15502 786 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 ZNF10P21506 573 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 MC4RP32245 332 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 CRATP43155 626 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 IDH2P48735 452 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 YBEYP58557 167 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 CREMQ03060 361 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 EPS8Q12929 822 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TXNDC11Q6PKC3 985 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 ALYREFQ86V81 257 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 RBFAQ8N0V3 343 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 LINGO1Q96FE5 620 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 PAIP1Q9H074 479 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 APOBEC3GQ9HC16 384 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 DDX18Q9NVP1 670 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 PLK2Q9NYY3 685 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 COPG1Q9Y678 874 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 C1QTNF3-AMACRE9PGA6 284 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 PRMT5O14744 637 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 POU5F1Q01860 360 aaKnown RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 GPR180Q86V85 440 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 CD101Q93033 1021 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TMPRSS4Q9NRS4 437 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TRAF6Q9Y4K3 522 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 ZNF541Q9H0D2 1346 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 PRR5-ARHGAP8B1AHC4 643 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TCEA3O75764 348 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 FTH1P02794 183 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 ASGR1P07306 291 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 SP100P23497 879 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 ARHGAP8P85298 464 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 CYP20A1Q6UW02 462 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 OTOP3Q7RTS5 596 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 OR8H2Q8N162 312 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 MIEF2Q96C03 454 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 DEFB118Q96PH6 123 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 NLNQ9BYT8 704 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 CHRAC1Q9NRG0 131 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 ECM29Q5VYK3 1845 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 TRIM24O15164 1050 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 LRIG2O94898 1065 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 CD48P09326 243 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 SLC5A3P53794 718 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 MBTD1Q05BQ5 628 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 SLC1A5Q15758 541 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 INO80DQ53TQ3 878 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 OR6K2Q8NGY2 324 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 GMLQ99445 158 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 STRA6Q9BX79 667 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 FAM124BQ9H5Z6 455 aaPredicted RBP11.54□□□□□ -0.56
NOD1-201ENST00000222823 ARHGEF4Q9NR80 690 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.54□□□□□ -0.56
NOD1-201ENST00000222823 NDOR1Q9UHB4 597 aa11.54□□□□□ -0.56
NOD1-201ENST00000222823 C1RP00736 705 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 PIGRP01833 764 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 CRHR1P34998 444 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 FASTKD3Q14CZ7 662 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 LYPLAL1Q5VWZ2 237 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 HLA-DQA1Q5Y7H0 255 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 SPESP1Q6UW49 350 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 FGD2Q7Z6J4 655 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 ZNF605Q86T29 641 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 WDR36Q8NI36 951 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 ZNF516Q92618 1163 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 USP7Q93009 1102 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 MAML3Q96JK9 1138 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 HNRNPABQ99729 332 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 HIPK3Q9H422 1215 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 WDR55Q9H6Y2 383 aaPredicted RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 GEMIN8Q9NWZ8 242 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 GMIPQ9P107 970 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 BTAF1O14981 1849 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 MYH11P35749 1972 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 FKTNO75072 461 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 CXCL14O95715 111 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 ABRQ12979 859 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 SEMA5AQ13591 1074 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 TAF5Q15542 800 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 INAQ16352 499 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 INTS6LQ5JSJ4 861 aaKnown RBP11.53□□□□□ -0.56
NOD1-201ENST00000222823 ZNF544Q6NX49 715 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
NOD1-201ENST00000222823 EPHX4Q8IUS5 362 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms