RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZBTB17Q13105 803 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 KRT33BQ14525 404 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 INPP5AQ14642 412 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 DRICH1Q6PGQ1 229 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 GVINP1Q7Z2Y8 2422 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 C11orf96Q7Z7L8 435 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CMTM8Q8IZV2 173 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 CDYL2Q8N8U2 506 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 WDR60Q8WVS4 1066 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 EVLQ9UI08 416 aaPredicted RBP12.11□□□□□ -0.47
CHPF2-201ENST00000035307 LRCH1Q9Y2L9 728 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 TEX264Q9Y6I9 313 aa12.11□□□□□ -0.47
CHPF2-201ENST00000035307 RFXAPO00287 272 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SYN3O14994 580 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 GNRH1P01148 92 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 TPBGLP0DKB5 382 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ANPEPP15144 967 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 TYMPP19971 482 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 GLDCP23378 1020 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 EEF1DP29692 281 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 RAB10P61026 200 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 DPYSL2Q16555 572 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 STXBP5Q5T5C0 1151 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ITIH5Q86UX2 942 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 CAND1Q86VP6 1230 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SMG7Q92540 1137 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SH3KBP1Q96B97 665 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF778Q96MU6 729 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 CAPN8A6NHC0 703 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 MGRN1O60291 552 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 HAPLN1P10915 354 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 PCNAP12004 261 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 LAG3P18627 525 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ME2P23368 584 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 C1QTNF8P60827 252 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 CNKSR3Q6P9H4 555 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 NIPA2Q8N8Q9 360 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 CRISPLD1Q9H336 500 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ZFP14Q9HCL3 533 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 STX18Q9P2W9 335 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SLC12A4Q9UP95 1085 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 INPPL1O15357 1258 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SLC2A4P14672 509 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 GRIA3P42263 894 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 NRG1Q02297 640 aaPredicted RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 TBCELQ5QJ74 424 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 GFM2Q969S9 779 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 BTN2A3PQ96KV6 586 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 SMIM14Q96QK8 99 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 POLR1EQ9GZS1 481 aaKnown RBP12.1□□□□□ -0.47
CHPF2-201ENST00000035307 ZDBF2Q9HCK1 2354 aa12.1□□□□□ -0.47
CHPF2-201ENST00000035307 TRIP11Q15643 1979 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 TBC1D3BA6NDS4 549 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 STX16-NPEPL1H3BU86 382 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 SYNCRIPO60506 623 aaKnown RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 PIK3R1P27986 724 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 RGS4P49798 205 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 GPR17Q13304 367 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 RNF220Q5VTB9 566 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 FBXO46Q6PJ61 603 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CNSTQ6PJW8 725 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 FLCNQ8NFG4 579 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 IGSF8Q969P0 613 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 LZTS1Q9Y250 596 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 KCTD3Q9Y597 815 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 AP2A1O95782 977 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CRHR1P34998 444 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 KLF10Q13118 480 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 TTC33Q6PID6 262 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 FSTL5Q8N475 847 aaPredicted RBP12.09□□□□□ -0.47
CHPF2-201ENST00000035307 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 FAM162AQ96A26 154 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 TMEM79Q9BSE2 394 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 GRIP2Q9C0E4 1043 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CCDC134Q9H6E4 229 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 NCOR1O75376 2440 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 GCATO75600 419 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CRTAMO95727 393 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 ATP6V1B2P21281 511 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
CHPF2-201ENST00000035307 CCDC81Q6ZN84 652 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms