RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gpsm3Q3U1Z5 159 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 LcorlQ3U285 600 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 BtrcQ3ULA2 605 aaKnown RBP11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Axdnd1Q3UZ57 424 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nqo1Q64669 274 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 AW551984Q8BGF0 804 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sit1Q8C503 180 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 EbplQ9D0P0 206 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Piwil1Q9JMB7 862 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Asap1Q9QWY8 1147 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 HaspinQ9Z0R0 754 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zc3h12bG3X9I7 835 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 BC024978J3QPC3 361 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc1a6O35544 561 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Npr1P18293 1057 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 CskP41241 450 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Eml1Q05BC3 814 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trafd1Q3UDK1 580 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc39a14Q75N73 489 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rccd1Q8BTU7 377 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Clptm1lQ8BXA5 539 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ndc80Q9D0F1 642 aaKnown RBP11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sec13Q9D1M0 322 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cab39lQ9DB16 337 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sertad3Q9ERC3 197 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rfx5Q9JL61 658 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Arih2Q9Z1K6 492 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mup18A2BIM8 181 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sod3O09164 251 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pde8aO88502 823 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mup11P04938 181 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Enpp1P06802 906 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PenkP22005 268 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Atp6v0d1P51863 351 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nudt1P53368 156 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm21320Q4FZE8 181 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp280bQ505F4 534 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 StyxQ60969 223 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lag3Q61790 521 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pnma8aQ80VM8 430 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Il17cQ8K4C5 194 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Stard13Q923Q2 1113 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pwp1Q99LL5 501 aaKnown RBP11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cdkn2aipnlQ9D211 116 aaKnown RBP11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zbed5B2RPU8 756 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tsc22d2E9Q7M2 769 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Hnrnph1O35737 449 aaKnown RBP11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 TyrobpO54885 114 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 DxoO70348 397 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Serpina3gQ5I2A0 440 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zdhhc20Q5Y5T1 380 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Adora2aQ60613 410 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fig4Q91WF7 907 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Il17rbQ9JIP3 499 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Orm2P07361 207 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Atxn1lP0C7T6 687 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Vav1P27870 845 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfm3P63056 478 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lcp2Q60787 533 aaKnown RBP11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trpm4Q7TN37 1213 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ppp2r1bQ7TNP2 601 aaKnown RBP11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rhbdf2Q80WQ6 827 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gpr21Q8BX79 349 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Btbd9Q8C726 612 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Spag16Q8K450 639 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1467Q8VFW1 308 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Get4Q9D1H7 327 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gipc2Q9Z2H7 314 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Myh8P13542 1937 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 BpgmP15327 259 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 WhammQ571B6 793 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sfmbt2Q5DTW2 938 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Bdkrb1Q61125 334 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cd300lfQ6SJQ7 337 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 NaprtQ8CC86 538 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 IlkapQ8R0F6 392 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 OlahQ8R197 265 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Sh3glb2Q8R3V5 400 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pcdhga10Q91XY9 930 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccdc130Q9D516 385 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 HephQ9Z0Z4 1157 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Btaf1E9QAE3 1848 aa11.9□□□□□ -0.5
Pcif1-201ENSMUST00000041643 SpibO35906 267 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hpcal1P62748 193 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Tbx4P70325 552 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 H2-M3Q31093 336 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Proser1Q5PRE5 913 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Smpd4Q6ZPR5 823 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Dhx33Q80VY9 698 aaKnown RBP11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ccdc184Q8BMK5 191 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Usp43Q8BUM9 1132 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Kctd12bQ8C7J6 292 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Adamts2Q8C9W3 1213 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Hormad1Q9D5T7 392 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ddx59Q9DBN9 619 aa11.9□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Znf711A2ANX9 761 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Lgr4A2ARI4 951 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Serpine3E9Q6A2 401 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Gm3755K7N743 167 aa11.89□□□□□ -0.51
Pcif1-201ENSMUST00000041643 Ces1cP23953 554 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms