RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ALPK3Q96L96 1907 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 CSF2P04141 144 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 WARSP23381 471 aaKnown RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NDUFS1P28331 727 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NUMBP49757 651 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 VAV2P52735 878 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 KCNJ2P63252 427 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 SOX4Q06945 474 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 MTM1Q13496 603 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 TOB2Q14106 344 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PCOLCEQ15113 449 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 KRTAP21-3Q3LHN1 58 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 CARD16Q5EG05 197 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NAIF1Q69YI7 327 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 TMEM71Q6P5X7 295 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 BNC2Q6ZN30 1099 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 TRAPPC11Q7Z392 1133 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 RBFAQ8N0V3 343 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 CPXM2Q8N436 756 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 OR56A4Q8NGH8 313 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 ASB11Q8WXH4 323 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 AGAP3Q96P47 875 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 KRT12Q99456 494 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PHACTR1Q9C0D0 580 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 MCCC2Q9HCC0 563 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 CGNQ9P2M7 1197 aaKnown RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 GRID2IPA4D2P6 1211 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 IGLON5A6NGN9 336 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PSMD12O00232 456 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 SCRG1O75711 98 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 ICAM2P13598 275 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 CETN2P41208 172 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 KIR2DL3P43628 341 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 HK3P52790 923 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 MLF1P58340 268 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PPP2CBP62714 309 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PPP2CAP67775 309 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NFATC4Q14934 902 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 TAF5Q15542 800 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 EFHC1Q5JVL4 640 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 FAM26FQ5R3K3 315 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 RFWD3Q6PCD5 774 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 PHLDB2Q86SQ0 1253 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NAGSQ8N159 534 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 ST6GALNAC3Q8NDV1 305 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 SIMC1Q8NDZ2 872 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 GPT2Q8TD30 523 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 NKD1Q969G9 470 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 FOPNLQ96NB1 174 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 RSPH9Q9H1X1 276 aaPredicted RBP4.38□□□□□ -1.71
GABRA1-220ENST00000638159 KCND1Q9NSA2 647 aa4.38□□□□□ -1.71
GABRA1-220ENST00000638159 FNDC1Q4ZHG4 1894 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MMP20O60882 483 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 RAMP2O60895 175 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TBX18O95935 607 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MYL1P05976 194 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PPARGP37231 505 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 OR1D5P58170 312 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MRPL58Q14197 206 aaKnown RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 RCAN2Q14206 197 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TRIP4Q15650 581 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MB21D2Q8IYB1 491 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 CYP4X1Q8N118 509 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 GALNT16Q8N428 558 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 FAM81BQ96LP2 452 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 JMJD8Q96S16 334 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 SLC22A12Q96S37 553 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 NIF3L1Q9GZT8 377 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 CATSPERBQ9H7T0 1116 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 METTL14Q9HCE5 456 aaKnown RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PCDHGA9Q9Y5G4 932 aaKnown RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PCDHGA3Q9Y5H0 932 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 DUSP10Q9Y6W6 482 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MCM3APO60318 1980 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TLN1Q9Y490 2541 aaKnown RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TTC26A0AVF1 554 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TTC34A8MYJ7 566 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 CLDN5O00501 218 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PFDN6O15212 129 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MOSPD3O75425 235 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MXI1P50539 228 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 DIO3P55073 304 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 MCCD1P59942 119 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 BST2Q10589 180 aaKnown RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 ZNF169Q14929 603 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 KLHL40Q2TBA0 621 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 ANKRD20A8PQ5CZ79 823 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 SPECC1LQ69YQ0 1117 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 ISLR2Q6UXK2 745 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TMPRSS9Q7Z410 1059 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 ADCK2Q7Z695 626 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 PRSS58Q8IYP2 241 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.37□□□□□ -1.71
GABRA1-220ENST00000638159 SHC3Q92529 594 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 POM121Q96HA1 1249 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 KLHL32Q96NJ5 620 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 AP1M1Q9BXS5 423 aa4.37□□□□□ -1.71
GABRA1-220ENST00000638159 SYTL2Q9HCH5 934 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms