RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	ARRB2	P32121	409 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ARL3	P36405	182 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	MLH1	P40692	756 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ENTPD1	P49961	510 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	PGGT1B	P53609	377 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ABAT	P80404	500 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175		Q0VFX4	171 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	MAMLD1	Q13495	774 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ARHGEF6	Q15052	776 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	KRT24	Q2M2I5	525 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	COL28A1	Q2UY09	1125 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	SOWAHC	Q53LP3	525 aa	Predicted RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	C6orf141	Q5SZD1	244 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	FNBP1L	Q5T0N5	605 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	HIST2H2BC	Q6DN03	193 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	HIST2H2BD	Q6DRA6	164 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	TTI2	Q6NXR4	508 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ANKRD54	Q6NXT1	300 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	CLEC4G	Q6UXB4	293 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	MTSS1L	Q765P7	747 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	PALB2	Q86YC2	1186 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ARHGAP12	Q8IWW6	846 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ZCCHC9	Q8N567	271 aa	Known RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	AADAT	Q8N5Z0	425 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ZBTB2	Q8N680	514 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	FRMD1	Q8N878	549 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	CLEC18C	Q8NCF0	446 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	HUS1B	Q8NHY5	278 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	SCARB1	Q8WTV0	552 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	TRIB2	Q92519	343 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	USP6NL	Q92738	828 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	SMARCE1	Q969G3	411 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ERGIC1	Q969X5	290 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	SLC41A2	Q96JW4	573 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	PPP1R13B	Q96KQ4	1090 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	FAM110A	Q9BQ89	295 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	C1QTNF5	Q9BXJ0	243 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	DCLK3	Q9C098	648 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	RBM38	Q9H0Z9	239 aa	Known RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	ESRP2	Q9H6T0	727 aa	Known RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	POLR1B	Q9H9Y6	1135 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	KIF9	Q9HAQ2	790 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	BPIFA1	Q9NP55	256 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	TMEM51	Q9NW97	253 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	CISD1	Q9NZ45	108 aa	Known RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	EHD2	Q9NZN4	543 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	OR6C3	Q9NZP0	311 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	DLGAP2	Q9P1A6	1054 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	AAR2	Q9Y312	384 aa	Known RBP	3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	LYVE1	Q9Y5Y7	322 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	SQOR	Q9Y6N5	450 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	STON1	Q9Y6Q2	735 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	TTC3	P53804	2025 aa		3.18	□□□□□ -1.9
ATRX-223	ENST00000637175	FAM237A	A0A1B0GTK4	181 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FAM237B	A0A1B0GVD1	139 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175		A0A1B0GVM2	712 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FAM90A10P	A6NDY2	464 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	PRSS47	A8MTI9	375 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	KDM4E	B2RXH2	506 aa	Predicted RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	EIF3CL	B5ME19	914 aa	Known RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	TIMM23	O14925	209 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	DOK2	O60496	412 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	OAZ2	O95190	189 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	CD58	P19256	250 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	GPT	P24298	496 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	HOXD3	P31249	432 aa	Predicted RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	AMT	P48728	403 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	NUDT6	P53370	316 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	DRG2	P55039	364 aa	Known RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	F2RL1	P55085	397 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	LINC00205	P59089	165 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	ARF3	P61204	181 aa	Predicted RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	ARF1	P84077	181 aa	Known RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	NIPAL4	Q0D2K0	466 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FRG1	Q14331	258 aa	Known RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	DRAP1	Q14919	205 aa	Predicted RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	MED22	Q15528	200 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	MEA1	Q16626	185 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	C2orf68	Q2NKX9	166 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	USP41	Q3LFD5	358 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FSCB	Q5H9T9	825 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	SPATA1	Q5VX52	437 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FAM205BP	Q63HN1	556 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	AWAT2	Q6E213	333 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	TMED8	Q6PL24	325 aa	Predicted RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	TSSK4	Q6SA08	328 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	C9orf47	Q6ZRZ4	202 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	WDR63	Q8IWG1	891 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	PRR26	Q8N8Z3	221 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	SCCPDH	Q8NBX0	429 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	AGBL3	Q8NEM8	1001 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	ASB5	Q8WWX0	329 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	WDFY2	Q96P53	400 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	BARD1	Q99728	777 aa	Known RBP	3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	EBF3	Q9H4W6	596 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	HCFC1R1	Q9NWW0	138 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	FZD10	Q9ULW2	581 aa		3.17	□□□□□ -1.9
ATRX-223	ENST00000637175	INSL5	Q9Y5Q6	135 aa		3.17	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms