RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PRR25Q96S07 402 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 CHCHD6Q9BRQ6 235 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 FUZQ9BT04 418 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 IDI2Q9BXS1 227 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 USP44Q9H0E7 712 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 BICC1Q9H694 974 aaKnown RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RMI1Q9H9A7 625 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PLEKHA5Q9HAU0 1116 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 VEZTQ9HBM0 779 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 EHD3Q9NZN3 535 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ORC3Q9UBD5 711 aaPredicted RBP2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 MGAT4CQ9UBM8 478 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 HSF4Q9ULV5 492 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC12A4Q9UP95 1085 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 RCE1Q9Y256 329 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PCDHA10Q9Y5I2 948 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PFASO15067 1338 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 PTPRCP08575 1304 aa2.68□□□□□ -1.98
SMARCB1-208ENST00000634926 ROBO3Q96MS0 1386 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 A6NCN8 305 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PGPEP1LA6NFU8 196 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 AGAP5A6NIR3 686 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 C3orf70A6NLC5 250 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TCP10L2B9ZVM9 353 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PDHXO00330 501 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 SPTLC2O15270 562 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ANP32CO43423 234 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DHX16O60231 1041 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ZBED4O75132 1171 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TULP3O75386 442 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CIAO1O76071 339 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 F9P00740 461 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 FGBP02675 491 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TMIGD3P0DMS9 266 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CCL5P13501 91 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ACP5P13686 325 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CAPN2P17655 700 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 MATN1P21941 496 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CHMP24386 653 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ABCD3P28288 659 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PSMC4P43686 418 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 KCNJ4P48050 445 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CLCN2P51788 898 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 NAP1L1P55209 391 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TPTEP56180 551 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DEUP1Q05D60 604 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 GALNT2Q10471 571 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 MTX1Q13505 466 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 THOC5Q13769 683 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 BMPR2Q13873 1038 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CBFBQ13951 182 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 KRT32Q14532 448 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TSTQ16762 297 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CCDC57Q2TAC2 916 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PRICKLE4Q2TBC4 344 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TBC1D25Q3MII6 688 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 SLC45A4Q5BKX6 768 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DENND2CQ68D51 928 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ITPRIPL1Q6GPH6 555 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CDC42EP5Q6NZY7 148 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 WDR93Q6P2C0 686 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 INO80CQ6PI98 192 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 C16orf54Q6UWD8 224 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 SYNE3Q6ZMZ3 975 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PTCHD4Q6ZW05 846 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PARS2Q7L3T8 475 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ZNF551Q7Z340 670 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 WDR53Q7Z5U6 358 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 P3H2Q8IVL5 708 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 SCYL3Q8IZE3 742 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 GALNT4Q8N4A0 578 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ANKRD52Q8NB46 1076 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 LSM14AQ8ND56 463 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ZMIZ2Q8NF64 920 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PRSS3P2Q8NHM4 247 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ZCCHC10Q8TBK6 192 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 FAM151AQ8WW52 585 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 STAMQ92783 540 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 TRMT61AQ96FX7 289 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 APOPT1Q96IL0 206 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 HERC2P3Q9BVR0 1158 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CINPQ9BW66 212 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PHF7Q9BWX1 381 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CDCP1Q9H5V8 836 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 STN1Q9H668 368 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DNAJC18Q9H819 358 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 SAP30LQ9HAJ7 183 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PDE11AQ9HCR9 933 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DDX4Q9NQI0 724 aaKnown RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 ARHGEF3Q9NR81 526 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 PPP1R14DQ9NXH3 145 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 DLL3Q9NYJ7 618 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CLIC5Q9NZA1 410 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 POLG2Q9UHN1 485 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CD207Q9UJ71 328 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 AMFRQ9UKV5 643 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 RAB21Q9UL25 225 aa2.67□□□□□ -1.98
SMARCB1-208ENST00000634926 CNPY2Q9Y2B0 182 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms