RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 PEX13Q92968 403 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 RCN3Q96D15 328 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 SPDL1Q96EA4 605 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 FEM1CQ96JP0 617 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 MARK4Q96L34 752 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 CRISPLD1Q9H336 500 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 ELAC1Q9H777 363 aaKnown RBP8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 EFCAB1Q9HAE3 211 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 CYP4F12Q9HCS2 524 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 MRGBPQ9NV56 204 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 MARCH4Q9P2E8 410 aaPredicted RBP8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 VPS28Q9UK41 221 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 KCTD3Q9Y597 815 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 PCDHB7Q9Y5E2 793 aa8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 COPG1Q9Y678 874 aaKnown RBP8.36□□□□□ -1.07
SND1-IT1-201ENST00000623342 MAGEA13PA6NCF6 341 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCL22O00626 93 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 KIF1CO43896 1103 aaKnown RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 TLR5O60602 858 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 VNN2O95498 520 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 EPOP01588 193 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZDHHC11BP0C7U3 371 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 KCNA5P22460 613 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CDKN2DP55273 166 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SP3Q02447 781 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ACVR1Q04771 509 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GALNT1Q10472 559 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SMARCB1Q12824 385 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 BTG3Q14201 252 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 RNF19BQ6ZMZ0 732 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 RNF111Q6ZNA4 994 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 LRRC8DQ7L1W4 858 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PGAM4Q8N0Y7 254 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PNPLA1Q8N8W4 532 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC43A3Q8NBI5 491 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ANKRD49Q8WVL7 239 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GATA6Q92908 595 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 MYEOVQ96EZ4 313 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 TBATAQ96M53 351 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF599Q96NL3 588 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 NR1H4Q96RI1 486 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 MARCH5Q9NX47 278 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SCOCQ9UIL1 159 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ADAMTS6Q9UKP5 1117 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 A0A1W2PQ45 241 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 A0A1W2PQY0 241 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 OR51F1A6NGY5 319 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 F5H5T6 163 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ENPP3O14638 875 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 MUSKO15146 869 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SKAP2O75563 359 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GJB3O75712 270 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GLP2RO95838 553 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 MYCP01106 439 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PENKP01210 267 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 LINGO3P0C6S8 592 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 RAG1P15918 1043 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 IMPDH1P20839 514 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SP100P23497 879 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 XIAPP98170 497 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ART3Q13508 389 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 RFTN1Q14699 578 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PIGGQ5H8A4 983 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GPR158Q5T848 1215 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 FUT10Q6P4F1 479 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 TMEM207Q6UWW9 146 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SDCCAG8Q86SQ7 713 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CUZD1Q86UP6 607 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PDSS2Q86YH6 399 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 LGI2Q8N0V4 545 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PELI3Q8N2H9 469 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 GPR150Q8NGU9 434 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 BRSK1Q8TDC3 778 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 BLOC1S5Q8TDH9 187 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 C2orf15Q8WU43 125 aaKnown RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PPP2R3CQ969Q6 453 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PHF21BQ96EK2 531 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CASD1Q96PB1 797 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CDRT15Q96T59 188 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 TRMOQ9BU70 441 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 KLHL4Q9C0H6 718 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SUDS3Q9H7L9 328 aaPredicted RBP8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 MEAF6Q9HAF1 191 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 PDFQ9HBH1 243 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 STARD7Q9NQZ5 370 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZDHHC7Q9NXF8 308 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 DLGAP2Q9P1A6 1054 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 SRRDQ9UH36 339 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 BCAP29Q9UHQ4 241 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 CRYL1Q9Y2S2 319 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 FIS1Q9Y3D6 152 aa8.35□□□□□ -1.07
SND1-IT1-201ENST00000623342 H3BNX3 289 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 H7C4K7 107 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 CD3EAPO15446 510 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 TBC1D4O60343 1298 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms