RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 EBF3Q9H4W6 596 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 STMN3Q9NZ72 180 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 INVSQ9Y283 1065 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ATP6AP2A0A1C7CYW4 349 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PLIN3O60664 434 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ATP6AP2O75787 350 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 AP2A1O95782 977 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 KRT6AP02538 564 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 KRT6BP04259 564 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 RPN2P04844 631 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF7P17097 686 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 IGFBP4P22692 258 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 KRT6CP48668 564 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 BOP1Q14137 746 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 GRM3Q14832 879 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MSS51Q4VC12 460 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ABRAXAS1Q6UWZ7 409 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 DPP10Q8N608 796 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PTCD3Q96EY7 689 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CCDC28BQ9BUN5 200 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 AHSPQ9NZD4 102 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 RAB26Q9ULW5 256 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TRPM3Q9HCF6 1732 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 HGFP14210 728 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PEX2P28328 305 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 HPCAL1P37235 193 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MAGEA10P43363 369 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 IL2P60568 153 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 SLC25A11Q02978 314 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TAF13Q15543 124 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TEX44Q53QW1 395 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 REP15Q6BDI9 236 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 SCIMPQ6UWF3 145 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ZDHHC13Q8IUH4 622 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CROCCP3Q8IVE0 287 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 POMGNT2Q8NAT1 580 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ACTRT2Q8TDY3 377 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CLEC4CQ8WTT0 213 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 DGCR6LQ9BY27 220 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 RPRD1BQ9NQG5 326 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ARHGEF4Q9NR80 690 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ALS2Q96Q42 1657 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CNTNAP1P78357 1384 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MYH13Q9UKX3 1938 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CXorf49A8MYA2 514 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 KCNU1A8MYU2 1149 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PTGES3LE9PB15 166 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CAPN15O75808 1086 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CAPN1P07384 714 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 VAV1P15498 845 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 JAK1P23458 1154 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PPP2R1BP30154 601 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 AQP4P55087 323 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MPP1Q00013 466 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ATAD3BQ5T9A4 648 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 AFTPHQ6ULP2 937 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 DET1Q7L5Y6 550 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CXorf40AQ8TE69 158 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MCRS1Q96EZ8 462 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ZNF570Q96NI8 536 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MRPL9Q9BYD2 267 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 NOL11Q9H8H0 719 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 BPIFA1Q9NP55 256 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CNGB3Q9NQW8 809 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 EGFL7Q9UHF1 273 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 LEF1Q9UJU2 399 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 FBXO5Q9UKT4 447 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PTCH2Q9Y6C5 1203 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 CHURC1-FNTBB4DL54 471 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 PIGRP01833 764 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MMP3P08254 477 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 NOS3P29474 1203 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ELAVL2Q12926 359 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TRIM25Q14258 630 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 DDR2Q16832 855 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 SETMARQ53H47 684 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MOB2Q70IA6 237 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 ADCY4Q8NFM4 1077 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 TMEM159Q96B96 161 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 C19orf60Q96EN9 201 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 GLOD4Q9HC38 313 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 MRPL17Q9NRX2 175 aaKnown RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 SH3BP4Q9P0V3 963 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 N4BP2Q86UW6 1770 aaPredicted RBP8.38□□□□□ -1.07
ALMS1-208ENST00000620466 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
ALMS1-208ENST00000620466 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 KPNA4O00629 521 aaPredicted RBP8.37□□□□□ -1.07
ALMS1-208ENST00000620466 ITM2AO43736 263 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 TIPRLO75663 272 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 ATG7O95352 703 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 CLTBP09497 229 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 NMBRP28336 390 aa8.37□□□□□ -1.07
ALMS1-208ENST00000620466 PSMD7P51665 324 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms