RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	SCN2B	O60939	215 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	SPIB	Q01892	262 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	GRSF1	Q12849	480 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZNF155	Q12901	538 aa	Predicted RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM35A	Q86V20	835 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZCCHC7	Q8N3Z6	543 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	PTCD2	Q8WV60	388 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ANKRD7	Q92527	254 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	C1orf50	Q9BV19	199 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	TAPBPL	Q9BX59	468 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	RAB11FIP5	Q9BXF6	653 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	UNK	Q9C0B0	810 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	RNPEP	Q9H4A4	650 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	CCNB1IP1	Q9NPC3	277 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	CMTM6	Q9NX76	183 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	DEC1	Q9P2X7	70 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	USP20	Q9Y2K6	914 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	CAPN6	Q9Y6Q1	641 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	MST1R	Q04912	1400 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	BTNL10	A8MVZ5	291 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	CLDN4	O14493	209 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	SIN3B	O75182	1162 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	UBXN7	O94888	489 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	PIGN	O95427	931 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	SNRPB2	P08579	225 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZBTB48	P10074	688 aa	Predicted RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	MC4R	P32245	332 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	BUD31	P41223	144 aa	Predicted RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	TOB1	P50616	345 aa	Predicted RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	SEC24C	P53992	1094 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	VBP1	P61758	197 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	CDK18	Q07002	472 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	TUSC3	Q13454	348 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	GALNT3	Q14435	633 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZNF846	Q147U1	533 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ERICH5	Q6P6B1	374 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	PTF1A	Q7RTS3	328 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	POLN	Q7Z5Q5	900 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	VSIG10L	Q86VR7	867 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	ALLC	Q8N6M5	410 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	PHF10	Q8WUB8	498 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	SMG7	Q92540	1137 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	TMEM27	Q9HBJ8	222 aa		7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	FBXO6	Q9NRD1	293 aa	Predicted RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	HBS1L	Q9Y450	684 aa	Known RBP	7.39	□□□□□ -1.23
PCDH15-231	ENST00000617271	LINC00854	A0A1B0GVQ3	168 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM86C2P	A6NEL3	165 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CHST10	O43529	356 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TOP3B	O95985	862 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ITGAV	P06756	1048 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	IDO1	P14902	403 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CBX5	P45973	191 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAAP100	Q0VG06	881 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MAPKAPK3	Q16644	382 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	NYAP1	Q6ZVC0	841 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	EIF1AD	Q8N9N8	165 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	AVL9	Q8NBF6	648 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	KIAA0895	Q8NCT3	520 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PJA1	Q8NG27	643 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	OR52K1	Q8NGK4	314 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	WFIKKN2	Q8TEU8	576 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PTCD3	Q96EY7	689 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	BTN2A3P	Q96KV6	586 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SEMA3C	Q99985	751 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PCDH12	Q9NPG4	1184 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GULP1	Q9UBP9	304 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ERGIC3	Q9Y282	383 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	BCL9	O00512	1426 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	XKRY	O14609	159 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MMP3	P08254	477 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CCDC166	P0CW27	439 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TFPI	P10646	304 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	RPL22	P35268	128 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SPAM1	P38567	509 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ASMT	P46597	345 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CORO7	P57737	925 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TAS2R50	P59544	299 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CACNG1	Q06432	222 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	LCN1P1	Q5VSP4	162 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CNST	Q6PJW8	725 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	NET1	Q7Z628	596 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TSPAN14	Q8NG11	270 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZHX1-C8orf76	Q96EF9	292 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	HIC2	Q96JB3	615 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	C8orf4	Q9NR00	106 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MCM8	Q9UJA3	840 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ABHD14A-ACY1	A0A1B0GW23	586 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	STX16-NPEPL1	H3BU86	382 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TRAFD1	O14545	582 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	STX16	O14662	325 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	UGT2B17	O75795	530 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GATB	O75879	557 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	RPL38	P63173	70 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SP2	Q02086	613 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GAD2	Q05329	585 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MAMLD1	Q13495	774 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM110C	Q1W6H9	321 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM153C	Q494X1	144 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PSRC1	Q6PGN9	363 aa	Predicted RBP	7.38	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms