RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FBXO5Q9UKT4 447 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 SSX2IPQ9Y2D8 614 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 ASB3Q9Y575 518 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 PCDHGB7Q9Y5F8 929 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 IRAK3Q9Y616 596 aa7.84□□□□□ -1.15
NEK3-207ENST00000617054 FAM95CA0A1B0GW59 222 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TYW5A2RUC4 315 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 ANTXRLA6NF34 631 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 KIAA0754O94854 1291 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 GOT2P00505 430 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 PTPN2P17706 415 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CR2P20023 1033 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CDC25CP30307 473 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ARRB2P32121 409 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 VIPR2P41587 438 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TAS2R39P59534 338 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TIFABQ6ZNK6 161 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CCDC121Q6ZUS5 278 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CHST9Q7L1S5 443 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PIM3Q86V86 326 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ARID3BQ8IVW6 561 aaPredicted RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 HJURPQ8NCD3 748 aaPredicted RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 OR4K2Q8NGD2 314 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 SREK1Q8WXA9 508 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 E2F7Q96AV8 911 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TRIB3Q96RU7 358 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 OLFM1Q99784 485 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 MTG2Q9H4K7 406 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TDP1Q9NUW8 608 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 SLCO3A1Q9UIG8 710 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 RUVBL2Q9Y230 463 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 CCDC162PA2VCL2 907 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 MROH6A6NGR9 719 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CCT8L1PA6NM43 557 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PLIN3O60664 434 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CEBPBP17676 345 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 SLC7A9P82251 487 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 DLG1Q12959 904 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 GPM6BQ13491 265 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 DGKKQ5KSL6 1271 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 RPS27LQ71UM5 84 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 TRPM8Q7Z2W7 1104 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 BBS5Q8N3I7 341 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ZNF366Q8N895 744 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PPP1R14CQ8TAE6 165 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TTC8Q8TAM2 541 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 GDPD5Q8WTR4 605 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CCT6BQ92526 530 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 NXNL1Q96CM4 212 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PRR11Q96HE9 360 aaPredicted RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 MCMBPQ9BTE3 642 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TASP1Q9H6P5 420 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PRKAG3Q9UGI9 489 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 DENND4CQ5VZ89 1909 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 A0A0C4DFX4 3053 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ANKRD12Q6UB98 2062 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 EPOPA6NHQ4 379 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 MYO1CO00159 1063 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 UBOX5O94941 541 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 BPGMP07738 259 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 SLC35E2BP0CK96 405 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 NRIP1P48552 1158 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 CREMQ03060 361 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 MESP2Q0VG99 397 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ITGA9Q13797 1035 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PCLAFQ15004 111 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 POM121L1PQ3SYA9 428 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 LY6G5CQ5SRR4 150 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 FYB2Q5VWT5 728 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 NAPRTQ6XQN6 538 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 GLT6D1Q7Z4J2 308 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PPP1R36Q96LQ0 422 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 DDX50Q9BQ39 737 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 BBS2Q9BXC9 721 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TDRD1Q9BXT4 1180 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 ABCG8Q9H221 673 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 PIDD1Q9HB75 910 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 ZDHHC4Q9NPG8 344 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 KLHL14Q9P2G3 628 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 LHX3Q9UBR4 397 aa7.83□□□□□ -1.16
NEK3-207ENST00000617054 TSR3Q9UJK0 312 aaKnown RBP7.83□□□□□ -1.16
NEK3-207ENST00000617054 NEMP2A6NFY4 417 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 ANKRD66B4E2M5 251 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 GFRA2O00451 464 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 ZNF189O75820 626 aaPredicted RBP7.82□□□□□ -1.16
NEK3-207ENST00000617054 ALADP13716 330 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 PAMP19021 973 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 CNTFP26441 200 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 MAGEA10P43363 369 aaPredicted RBP7.82□□□□□ -1.16
NEK3-207ENST00000617054 SERPINB8P50452 374 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
NEK3-207ENST00000617054 CILP2Q8IUL8 1156 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 C2CD4AQ8NCU7 369 aaPredicted RBP7.82□□□□□ -1.16
NEK3-207ENST00000617054 BRSK1Q8TDC3 778 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 EID2BQ96D98 161 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 SCYL1Q96KG9 808 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 ZNF599Q96NL3 588 aa7.82□□□□□ -1.16
NEK3-207ENST00000617054 RHOJQ9H4E5 214 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms