RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 ADRA1DP25100 572 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 HOXA6P31267 233 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 MRPS25P82663 173 aaKnown RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CREB5Q02930 508 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 ITKQ08881 620 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CCDC15Q0P6D6 951 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 NAB1Q13506 487 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 HLTFQ14527 1009 aaKnown RBP eCLIP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 AGERQ15109 404 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CDKN3Q16667 212 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 TMEM52BQ4KMG9 183 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 PCID2Q5JVF3 399 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 FAXCQ5TGI0 409 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 ZNF776Q68DI1 518 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 USP30Q70CQ3 517 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 DPPA4Q7L190 304 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SYT13Q7L8C5 426 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 GALNT7Q86SF2 657 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SDCCAG8Q86SQ7 713 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 TMEM135Q86UB9 458 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SFTPA1Q8IWL2 248 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CBARPQ8N350 705 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SDR16C5Q8N3Y7 309 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 TTC30BQ8N4P2 665 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 IPMKQ8NFU5 416 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SORCS1Q8WY21 1168 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SLX1AQ9BQ83 275 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 FSD1LQ9BXM9 530 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CDH19Q9H159 772 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 SLC24A3Q9HC58 644 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 KCTD5Q9NXV2 234 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 CACNA2D2Q9NY47 1150 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
CBWD3-210ENST00000614398 TCAF1Q9Y4C2 921 aa6.28□□□□□ -1.4
CBWD3-210ENST00000614398 LAMA2P24043 3122 aaKnown RBP6.27□□□□□ -1.4
CBWD3-210ENST00000614398 HEATR9A2RTY3 570 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 H0Y858 1186 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 H7C0S8 307 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 PMPCBO75439 489 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TCEA3O75764 348 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 USP1O94782 785 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 ALDH1A2O94788 518 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 CTSLP07711 333 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 NUDT17P0C025 328 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 COPAP53621 1224 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 SIGLEC14Q08ET2 396 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 STARD3Q14849 445 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 RASA2Q15283 850 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TAF1AQ15573 450 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 SPANXN3Q5MJ09 141 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 BEND6Q5SZJ8 279 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 FNBP1LQ5T0N5 605 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 IER5LQ5T953 404 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 ZDHHC20Q5W0Z9 365 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 LMNTD2Q8IXW0 634 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 AGGF1Q8N302 714 aaeCLIP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 CHST14Q8NCH0 376 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 OR52K1Q8NGK4 314 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TTC8Q8TAM2 541 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 BRSK1Q8TDC3 778 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 ASB12Q8WXK4 309 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 IFT81Q8WYA0 676 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 EDAQ92838 391 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 SCRN2Q96FV2 425 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 WDR83Q9BRX9 315 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TMEM109Q9BVC6 243 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TM6SF2Q9BZW4 377 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 PABPC3Q9H361 631 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TREX1Q9NSU2 369 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 FZD4Q9ULV1 537 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 MYO18AQ92614 2054 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 ANKRD66B4E2M5 251 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 AREL1O15033 823 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 RNASEH1O60930 286 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 LEFTY1O75610 366 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 FSBPO95073 299 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 KLF8O95600 359 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 AGTP01019 485 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 CYP2A6P11509 494 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TIMP2P16035 220 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 TEAD1P28347 426 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 MAGEA4P43358 317 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 DGKEP52429 567 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 ZNF140P52738 457 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 DCDC1P59894 354 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 RPS14P62263 151 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 DHX9Q08211 1270 aaKnown RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 MSS51Q4VC12 460 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 C2orf27AQ580R0 203 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 KIAA0930Q6ICG6 404 aaPredicted RBP6.27□□□□□ -1.41
CBWD3-210ENST00000614398 PKN3Q6P5Z2 889 aa6.27□□□□□ -1.41
CBWD3-210ENST00000614398 USP45Q70EL2 814 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms