RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GPR15P49685 360 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 GRB7Q14451 532 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 DDR2Q16832 855 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 TMEM207Q6UWW9 146 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 LPCAT2Q7L5N7 544 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 RETREG3Q86VR2 466 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 DHFR2Q86XF0 187 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 BRI3BPQ8WY22 251 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 VAT1Q99536 393 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 FAM105AQ9NUU6 356 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 CNOT6Q9ULM6 557 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 PRRC2BQ5JSZ5 2229 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 MKI67P46013 3256 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 SLCO1B7G3V0H7 640 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 LTA4HP09960 611 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 ATP6V1B2P21281 511 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 STT3AP46977 705 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 NDST2P52849 883 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 GALNT3Q14435 633 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 TBCELQ5QJ74 424 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 CXCL17Q6UXB2 119 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 BHLHA9Q7RTU4 235 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 NAT16Q8N8M0 369 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 PTGR2Q8N8N7 351 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 OR10T2Q8NGX3 314 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 RDH11Q8TC12 318 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 SLCO4A1Q96BD0 722 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 ASB9Q96DX5 294 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 EXOC2Q96KP1 924 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 PPP1R10Q96QC0 940 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 SEPHS2Q99611 448 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 NMUR1Q9HB89 426 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 FLRT1Q9NZU1 646 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 GOLGA8CPA6NN73 597 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CRCPO75575 148 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 F2P00734 622 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 LHX1P48742 406 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 GEMP55040 296 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CPSF7Q8N684 471 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 FAM81AQ8TBF8 368 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 PSMG2Q969U7 264 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CCDC28BQ9BUN5 200 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 UNC93B1Q9H1C4 597 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 RGS18Q9NS28 235 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 USP22Q9UPT9 525 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 VWA7Q9Y334 891 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 ARL5AQ9Y689 179 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 HHLA1C9JL84 531 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 SCAMP3O14828 347 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 INPP4BO15327 924 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 SUPT3HO75486 399 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 ALDOCP09972 364 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 TECRLQ5HYJ1 363 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CHSY3Q70JA7 882 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 BNIPLQ7Z465 357 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CLVS1Q8IUQ0 354 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 NCSTNQ92542 709 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 HSPBAP1Q96EW2 488 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 MRPS26Q9BYN8 205 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 AKTIPQ9H8T0 292 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 UXTQ9UBK9 157 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 EVLQ9UI08 416 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 TBC1D30Q9Y2I9 924 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 TDRKHQ9Y2W6 561 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 A0A0J9YYE9 177 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 C17orf102A2RUQ5 167 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 TRMUO75648 421 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 HTTP42858 3142 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 SLC5A3P53794 718 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 DIO3P55073 304 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 SCAPQ12770 1279 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 PLCL1Q15111 1095 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 RABL3Q5HYI8 236 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 HMBOX1Q6NT76 420 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 CATSPER1Q8NEC5 780 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 OR13C4Q8NGS5 318 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 PTERQ96BW5 349 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 HMCESQ96FZ2 354 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 C1orf50Q9BV19 199 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 FAM124BQ9H5Z6 455 aaPredicted RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 SARS2Q9NP81 518 aaKnown RBP14.1□□□□□ -0.15
COL6A1-207ENST00000612273 NSMCE4AQ9NXX6 385 aa14.1□□□□□ -0.15
COL6A1-207ENST00000612273 A0A1W2PQH9 124 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PIP5K1BO14986 540 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 MATN3O15232 486 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 SH3BP2P78314 561 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 RHDQ02161 417 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 LRP8Q14114 963 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 IHHQ14623 411 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 ALFQ53S48 1182 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 OTUD3Q5T2D3 398 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 PLEKHH3Q7Z736 793 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 C2CD4AQ8NCU7 369 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 RMND5BQ96G75 393 aaPredicted RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 FCRL5Q96RD9 977 aa14.09□□□□□ -0.15
COL6A1-207ENST00000612273 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
COL6A1-207ENST00000612273 ATXN10Q9UBB4 475 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms