RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 VASH2Q86V25 355 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 PHF13Q86YI8 300 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MED8Q96G25 268 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 WBP1Q96G27 269 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMEM74Q96NL1 305 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 ARHGAP9Q9BRR9 750 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 LRRN3Q9H3W5 708 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 DHX35Q9H5Z1 703 aaKnown RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 SP110Q9HB58 689 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 FGF22Q9HCT0 170 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 MRPL40Q9NQ50 206 aaKnown RBP13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 LOXL2Q9Y4K0 774 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 BOD1L1Q8NFC6 3051 aa13.44□□□□□ -0.26
HMGB1P24-201ENST00000611897 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMEM202A6NGA9 273 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ARHGAP42A6NI28 874 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 SIGLEC16A6NMB1 481 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMCO5BA8MYB1 307 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 B8ZZF3 427 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 DFFAO00273 331 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 EEF2KO00418 725 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 TEX33O43247 280 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 PALMO75781 387 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 PAPOLAP51003 745 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 SUOXP51687 545 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 EIF3IQ13347 325 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 GRM3Q14832 879 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ACOX1Q15067 660 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 CDKAL1Q5VV42 579 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 DENND2CQ68D51 928 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 BRAT1Q6PJG6 821 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 LVRNQ6Q4G3 990 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 UMODL1-AS1Q8N2C9 162 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 TSEN2Q8NCE0 465 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 OR56A4Q8NGH8 313 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 AGPAT1Q99943 283 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 CNPY3Q9BT09 278 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 DPEP2Q9H4A9 486 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 ATP13A3Q9H7F0 1226 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 PDFQ9HBH1 243 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 CYP4F12Q9HCS2 524 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 PCSK1NQ9UHG2 260 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 AP4E1Q9UPM8 1137 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 HEMK1Q9Y5R4 338 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P24-201ENST00000611897 HECTD1Q9ULT8 2610 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 PSMA2P25787 234 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 GSCP56915 257 aaPredicted RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 OGDHQ02218 1023 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 UBXN1Q04323 297 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 BCL2L1Q07817 233 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 BIRC2Q13490 618 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 CA9Q16790 459 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 AMZ1Q400G9 498 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 SRLQ86TD4 932 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 CCL4L1Q8NHW4 92 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 PDCD6IPQ8WUM4 868 aaKnown RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 SNRNP27Q8WVK2 155 aaKnown RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 EXTL1Q92935 676 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 FUBP1Q96AE4 644 aaKnown RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 ZNF641Q96N77 438 aaPredicted RBP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 SLC39A8Q9C0K1 460 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 ZMYND15Q9H091 742 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMEM168Q9H0V1 697 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 LRRC19Q9H756 370 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 WDR26Q9H7D7 661 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 RNF215Q9Y6U7 377 aa13.42□□□□□ -0.26
HMGB1P24-201ENST00000611897 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 PRAMEF33A0A0G2JMD5 474 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 TTC24A2A3L6 582 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 LGALS16A8MUM7 142 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 WASH4PA8MWX3 477 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 PRAMEF10O60809 474 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 KELP23276 732 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 ETV5P41161 510 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 PPM1FP49593 454 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 SCNN1BP51168 640 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 NDST2P52849 883 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 MAZP56270 477 aaKnown RBP13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 KIAA1024LP59773 190 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 NFKB2Q00653 900 aa13.41□□□□□ -0.26
HMGB1P24-201ENST00000611897 RALGDSQ12967 914 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms