RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 NDST2P52849 883 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 SLC25A3Q00325 362 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ABRQ12979 859 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 PDE1CQ14123 709 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 CYP51A1Q16850 503 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 FSTL4Q6MZW2 842 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 KIAA1324Q6UXG2 1013 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 RNF19BQ6ZMZ0 732 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ARCQ7LC44 396 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 PQLC3Q8N755 202 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 CATSPER1Q8NEC5 780 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 OR10T2Q8NGX3 314 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF398Q8TD17 642 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 CXorf40AQ8TE69 158 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 PPP1R16AQ96I34 528 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 VPS50Q96JG6 964 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 YIPF3Q9GZM5 350 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 DCLRE1BQ9H816 532 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 NMUR1Q9HB89 426 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 IGSF9Q9P2J2 1179 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 TBC1D14Q9P2M4 693 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 GNPTGQ9UJJ9 305 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 FBXO10Q9UK96 956 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF510Q9Y2H8 683 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 NDUFAF1Q9Y375 327 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 SNX5Q9Y5X3 404 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 TNRC6CQ9HCJ0 1690 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 MARF1Q9Y4F3 1742 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ABHD14A-ACY1A0A1B0GW23 586 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 MBLAC1A4D2B0 266 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 J3KR12 359 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 INSIG1O15503 277 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 MAP3K13O43283 966 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ABCB1P08183 1280 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ELFN1P0C7U0 828 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ACVRL1P37023 503 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 PLOD1Q02809 727 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 IL10RBQ08334 325 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF460Q14592 562 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 LRRC73Q5JTD7 316 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 MARCH8Q5T0T0 291 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 HECTD2Q5U5R9 776 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 LIPMQ5VYY2 423 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 CYP2R1Q6VVX0 501 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 METTL3Q86U44 580 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ALYREFQ86V81 257 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 DCBLD1Q8N8Z6 715 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 ZNF461Q8TAF7 563 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 C2orf15Q8WU43 125 aaKnown RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 SELENOMQ8WWX9 145 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 OTULINQ96BN8 352 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 WDR55Q9H6Y2 383 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-218ENST00000610726 BRD9Q9H8M2 597 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 INSL6Q9Y581 213 aa7.31□□□□□ -1.24
CSDE1-218ENST00000610726 CEP290O15078 2479 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 TMEM114B3SHH9 223 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 C1QTNF3-AMACRE9PGA6 284 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 GRM6O15303 877 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 RPP40O75818 363 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CNTN5O94779 1100 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 USP1O94782 785 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 ADH1CP00326 375 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 HLA-DQB2P05538 268 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 UBTFL6P0CB48 400 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 VHLP40337 213 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CXCR3P49682 368 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CLDN10P78369 228 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 FPGSQ05932 587 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 KLC1Q07866 573 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 PPIDQ08752 370 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CBX2Q14781 532 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CPSF6Q16630 551 aaKnown RBP eCLIP7.3□□□□□ -1.243e-7■□□□□ 8.6
CSDE1-218ENST00000610726 MSS51Q4VC12 460 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 ADGRF1Q5T601 910 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 TPGS2Q68CL5 300 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CHST9Q7L1S5 443 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 GPRIN1Q7Z2K8 1008 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 TMCO2Q7Z6W1 182 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 OSBPL2Q9H1P3 480 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 TRIM45Q9H8W5 580 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 STX18Q9P2W9 335 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CROTQ9UKG9 612 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 ZBTB42B2RXF5 422 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 FAM72CH0Y354 149 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 PSMD12O00232 456 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 DNM1LO00429 736 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 HSPA1AP0DMV8 641 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 HSPA1BP0DMV9 641 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 COL6A1P12109 1028 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 PKMP14618 531 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 PSMA4P25789 261 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 MAPK1P28482 360 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 THOP1P52888 689 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 LIMK2P53671 638 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 KCNJ2P63252 427 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 UBAP2LQ14157 1087 aaKnown RBP7.3□□□□□ -1.24
CSDE1-218ENST00000610726 CCDC157Q569K6 752 aa7.3□□□□□ -1.24
CSDE1-218ENST00000610726 FAM72AQ5TYM5 149 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms