RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 PHF21BQ96EK2 531 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 SMARCD1Q96GM5 515 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 PPP1R2P1Q96PQ5 205 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 ATXN3LQ9H3M9 355 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 TRAF6Q9Y4K3 522 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 IGLV3-25P01717 112 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 CYP2C18P33260 490 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 LEPRP48357 1165 aaKnown RBP17.14■□□□□ 0.33
EWSR1-221ENST00000610553 CLCN5P51795 746 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 SEPT6Q14141 434 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 ACAP2Q15057 778 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 SLC22A9Q8IVM8 553 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 FUNDC1Q8IVP5 155 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 RNF34Q969K3 372 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 PPWD1Q96BP3 646 aaKnown RBP17.14■□□□□ 0.33
EWSR1-221ENST00000610553 ROPN1LQ96C74 230 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 BIRC8Q96P09 236 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 TRMOQ9BU70 441 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
EWSR1-221ENST00000610553 CLK4Q9HAZ1 481 aaKnown RBP17.14■□□□□ 0.33
EWSR1-221ENST00000610553 CSNK1G1Q9HCP0 422 aa17.14■□□□□ 0.33
EWSR1-221ENST00000610553 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
EWSR1-221ENST00000610553 BMP10O95393 424 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ALDOCP09972 364 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 GRIA3P42263 894 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 PRKCQQ04759 706 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 EIF4EBP2Q13542 120 aaPredicted RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 LPIN1Q14693 890 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ARTNQ5T4W7 220 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 CLEC6AQ6EIG7 209 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 RETREG3Q86VR2 466 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 FAM47BQ8NA70 645 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 TRPC4APQ8TEL6 797 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ANKRD49Q8WVL7 239 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 SLC39A8Q9C0K1 460 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 GMPR2Q9P2T1 348 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 SLC8A2Q9UPR5 921 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 TRIM64CA6NLI5 447 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 WISP3O95389 354 aaPredicted RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ADAM17P78536 824 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 KCTD21Q4G0X4 260 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 MANEALQ5VSG8 457 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 C19orf60Q96EN9 201 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 TCF12Q99081 682 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 GPATCH1Q9BRR8 931 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 SIK2Q9H0K1 926 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 FBRSL1Q9HCM7 1045 aaKnown RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ABCD2Q9UBJ2 740 aa17.13■□□□□ 0.33
EWSR1-221ENST00000610553 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
EWSR1-221ENST00000610553 ATP6AP2A0A1C7CYW4 349 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 DLGAP1O14490 977 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 AKAP10O43572 662 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 ATP6AP2O75787 350 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 MT-CO1P00395 513 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 IMPDH1P20839 514 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 GJA5P36382 358 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 NOMO2Q5JPE7 1267 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 PITRM1Q5JRX3 1037 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 DHRS4L2Q6PKH6 230 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 LZTR1Q8N653 840 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 MFSD2AQ8NA29 543 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 L3HYPDHQ96EM0 354 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 TSPAN17Q96FV3 270 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 CCM2LQ9NUG4 571 aaPredicted RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 RBM22Q9NW64 420 aaKnown RBP eCLIP17.12■□□□□ 0.335e-8■■■□□ 16.9
EWSR1-221ENST00000610553 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 TRIP12Q14669 1992 aaPredicted RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 hCG_2014768A0A024R1R8 64 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 BBIP1A8MTZ0 92 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 FGF10O15520 208 aaPredicted RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 GPX3P22352 226 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 CDH15P55291 814 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 ZNF678Q5SXM1 525 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 INTS11Q5TA45 600 aaKnown RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 HECTD2Q5U5R9 776 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 KDELC2Q7Z4H8 507 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 EPHX4Q8IUS5 362 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 PACRGLQ8N7B6 248 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 GTF3C2Q8WUA4 911 aaPredicted RBP17.12■□□□□ 0.33
EWSR1-221ENST00000610553 ZUFSPQ96AP4 578 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
EWSR1-221ENST00000610553 MIA3Q5JRA6 1907 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 MEIS3P2A8K0S8 358 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 NME4O00746 187 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 IRAK2O43187 625 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 PFDN1O60925 122 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 STAMBPO95630 424 aa17.11■□□□□ 0.33
EWSR1-221ENST00000610553 STX1BP61266 288 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms