RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RFPL1O75677 317 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRT37O76014 449 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CRYZL1O95825 349 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GSRP00390 522 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 C1QAP02745 245 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 DLATP10515 647 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 RALBP11234 206 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 COX4I1P13073 169 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CTRB1P17538 263 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 RPL17P18621 184 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 IMPDH1P20839 514 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TACR2P21452 398 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 IL32P24001 234 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TBXAS1P24557 533 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRKCHP24723 683 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CXCR2P25025 360 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CD40LGP29965 261 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC7A1P30825 629 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAPK4P31152 587 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GABRB2P47870 512 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CASP4P49662 377 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SERPINB9P50453 376 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 HLCSP50747 726 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 EPHB1P54762 984 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PEX3P56589 373 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 NME5P56597 212 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 YWHAGP61981 247 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMPRSS15P98073 1019 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 MPP1Q00013 466 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ECT2LQ008S8 904 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FMO1Q01740 532 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNTN2Q02246 1040 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 OCA2Q04671 838 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KLF10Q13118 480 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 NAB1Q13506 487 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRR1Q13601 381 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GK3PQ14409 553 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACAP1Q15027 740 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SURF1Q15526 300 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAPRE1Q15691 268 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 DLG2Q15700 870 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZYXQ15942 572 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 NFE2Q16621 373 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 EPC2Q52LR7 807 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM47CQ5HY64 1035 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FGD3Q5JSP0 725 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC10A5Q5PT55 438 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TCHHL1Q5QJ38 904 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 C6orf183Q5T699 404 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 WDR78Q5VTH9 848 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRAMEF18Q5VWM3 479 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CTRB2Q6GPI1 263 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRT80Q6KB66 452 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ERAP2Q6P179 960 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GJB7Q6PEY0 223 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 EPGNQ6UW88 154 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KIAA0408Q6ZU52 694 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 STXBP4Q6ZWJ1 553 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPBP1Q86WP2 473 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF677Q86XU0 584 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARMC8Q8IUR7 673 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PALM2Q8IXS6 379 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ANKRD13AQ8IZ07 590 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 UNC5BQ8IZJ1 945 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PGAM4Q8N0Y7 254 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 AFAP1L2Q8N4X5 818 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC25A41Q8N5S1 370 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBR7Q8N806 425 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNTD1Q8N815 330 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TTLL6Q8N841 843 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KYQ8NBH2 561 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 LEMD2Q8NC56 503 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GRPEL2Q8TAA5 225 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC35B2Q8TB61 432 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 PDCD6IPQ8WUM4 868 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SHC3Q92529 594 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ATP2A3Q93084 1043 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRRC39Q96DD0 335 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 WNK4Q96J92 1243 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAGED4Q96JG8 741 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SERAC1Q96JX3 654 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 RILPQ96NA2 401 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 DACH2Q96NX9 599 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM111AQ96PZ2 611 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDK5RAP1Q96SZ6 601 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 EYA3Q99504 573 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TMEM79Q9BSE2 394 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 STRA6Q9BX79 667 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 GON7Q9BXV9 100 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FGFBP2Q9BYJ0 223 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SHCBP1LQ9BZQ2 653 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KLHL25Q9H0H3 589 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TP63Q9H3D4 680 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLA2Q9H6Q3 261 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 RPAP3Q9H6T3 665 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 COQ10BQ9H8M1 238 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 MARCH7Q9H992 704 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms