RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MAN2A2P49641 1150 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 AP1S1P61966 158 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SLC12A1Q13621 1099 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CAMK1Q14012 370 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 PDK2Q15119 407 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 PCBP1Q15365 356 aaKnown RBP eCLIP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SEC23AQ15436 765 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ANXA8L1Q5VT79 327 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TIGD3Q6B0B8 471 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SLFN12LQ6IEE8 588 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 C11orf88Q6PI97 169 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ZYG11AQ6WRX3 759 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CFAP77Q6ZQR2 320 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 BTLAQ7Z6A9 289 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LHFPL3Q86UP9 236 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TRABD2AQ86V40 505 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LYSMD2Q8IV50 215 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TIGD4Q8IY51 512 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 METTL13Q8N6R0 699 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LRRC57Q8N9N7 239 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CLRN3Q8NCR9 226 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CMASQ8NFW8 434 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 AGR3Q8TD06 166 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 C19orf60Q96EN9 201 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 MRPL48Q96GC5 212 aaKnown RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TMEM121Q9BTD3 319 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ALX4Q9H161 411 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 BOLA2Q9H3K6 86 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SEC31BQ9NQW1 1179 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 KLHL1Q9NR64 748 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SEMA3GQ9NS98 782 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 WWOXQ9NZC7 414 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 PCYOX1Q9UHG3 505 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LRFN2Q9ULH4 789 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LTN1O94822 1766 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 MYH14Q7Z406 1995 aaKnown RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 KIF13BQ9NQT8 1826 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 A0A1B0GTW7 788 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ZBBXA8MT70 800 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 E7EWF7 191 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CALUO43852 315 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 DFNA5O60443 496 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 IPO13O94829 963 aaKnown RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 BMP15O95972 392 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SLC2A4P14672 509 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ATP5C1P36542 298 aaKnown RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 RAD23AP54725 363 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ERVK-8P63133 956 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 RBP5P82980 135 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ZMYND11Q15326 602 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SAPCD1Q5SSQ6 148 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CCNYL2Q5T2Q4 361 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 KRT40Q6A162 431 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF530Q6P9A1 599 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 FOXR2Q6PJQ5 311 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SYCE1Q8N0S2 351 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 C12orf29Q8N999 325 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 C3orf58Q8NDZ4 430 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 MAGEE2Q8TD90 523 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 PHF10Q8WUB8 498 aaKnown RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 HEXDCQ8WVB3 486 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TCEAL3Q969E4 200 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LRRC39Q96DD0 335 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 KLHL32Q96NJ5 620 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 C11orf49Q9H6J7 331 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 FAM207AQ9NSI2 230 aaPredicted RBP8.91□□□□□ -0.98
COMMD3-215ENST00000602574 LIPT1Q9Y234 373 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 POMPQ9Y244 141 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 NDUFAF1Q9Y375 327 aa8.91□□□□□ -0.98
COMMD3-215ENST00000602574 CNTNAP1P78357 1384 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ANKRD36CQ5JPF3 1778 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 A0A1W2PRG0 241 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF729A6NN14 1252 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CAPN5O15484 640 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CYP26A1O43174 497 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 FOXO3O43524 673 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 TTC4O95801 387 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 DLDP09622 509 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 COX5BP10606 129 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 FGFR4P22455 802 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CHRNA3P32297 505 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CRHR1P34998 444 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 GRK3P35626 688 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 GRIA3P42263 894 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ATP12AP54707 1039 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 MFAP3P55082 362 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF267Q14586 743 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 PUM3Q15397 648 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF782Q6ZMW2 699 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 C16orf86Q6ZW13 317 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 USP45Q70EL2 814 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ZDHHC13Q8IUH4 622 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 RBFAQ8N0V3 343 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 SLC43A2Q8N370 569 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 SLC25A41Q8N5S1 370 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 PCDH20Q8N6Y1 951 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 TDRD5Q8NAT2 981 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms