RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CFAP46Q8IYW2 2715 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 RP1P56715 2156 aa13.24□□□□□ -0.29
RPS28-204ENST00000602140 HELZ2Q9BYK8 2649 aaKnown RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 EIF3CLB5ME19 914 aaKnown RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 DFFAO00273 331 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 TEX33O43247 280 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 ERCC2P18074 760 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 CCL7P80098 99 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 RALGDSQ12967 914 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 PPP6R3Q5H9R7 873 aaPredicted RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 LIPIQ6XZB0 460 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 RFX8Q6ZV50 586 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 B3GNT8Q7Z7M8 397 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 ZNF605Q86T29 641 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 ARHGAP12Q8IWW6 846 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 AOPEPQ8N6M6 819 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 OR1E3Q8WZA6 343 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 FUBP1Q96AE4 644 aaKnown RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 PDXPQ96GD0 296 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 LIN37Q96GY3 246 aaPredicted RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 GFM1Q96RP9 751 aaKnown RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 RBM15Q96T37 977 aaKnown RBP eCLIP13.23□□□□□ -0.29
RPS28-204ENST00000602140 EIF3CQ99613 913 aaKnown RBP13.23□□□□□ -0.29
RPS28-204ENST00000602140 TRIM7Q9C029 511 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 SP110Q9HB58 689 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 LRRK1Q38SD2 2015 aa13.23□□□□□ -0.29
RPS28-204ENST00000602140 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 CFAP69A5D8W1 941 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 TMEM202A6NGA9 273 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 LRRC53A6NM62 1247 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 A8MX80 341 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 D6RAR5 112 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 CACNB4O00305 520 aaPredicted RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 PLD2O14939 933 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 RNF8O76064 485 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 ITGA2BP08514 1039 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 ELFN1P0C7U0 828 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 MIPP30301 263 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 SCNN1BP51168 640 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 NSUN2Q08J23 767 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPS28-204ENST00000602140 RFTN1Q14699 578 aaPredicted RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 CYP4V2Q6ZWL3 525 aaPredicted RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 TAF8Q7Z7C8 310 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 CLEC14AQ86T13 490 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 FBXO39Q8N4B4 442 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 NPWQ8N729 165 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 FAM46DQ8NEK8 389 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 OR6C4Q8NGE1 309 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 OR56A4Q8NGH8 313 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 SNRNP27Q8WVK2 155 aaKnown RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 GBP4Q96PP9 640 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 FOXP3Q9BZS1 431 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 LRRN3Q9H3W5 708 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 FGF22Q9HCT0 170 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
RPS28-204ENST00000602140 DGKBQ9Y6T7 804 aa13.22□□□□□ -0.29
RPS28-204ENST00000602140 K7ENP7 123 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 TRAFD1O14545 582 aaPredicted RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 PLA2G2AP14555 144 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 INHBCP55103 352 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 KIAA1024LP59773 190 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 IL10RBQ08334 325 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 CLN3Q13286 438 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 ASIC2Q16515 512 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 INO80CQ6PI98 192 aaPredicted RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 DPPA4Q7L190 304 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 RAB11FIP2Q7L804 512 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 TP53INP2Q8IXH6 220 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 Q8N9G6 341 aaPredicted RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 FNIP1Q8TF40 1166 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 WBP1Q96G27 269 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 STRADBQ9C0K7 418 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 HAUS4Q9H6D7 363 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 WDR70Q9NW82 654 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 CWC15Q9P013 229 aaKnown RBP13.21□□□□□ -0.29
RPS28-204ENST00000602140 MOSPD1Q9UJG1 213 aa13.21□□□□□ -0.29
RPS28-204ENST00000602140 LRP4O75096 1905 aa13.21□□□□□ -0.3
RPS28-204ENST00000602140 ANKRD36A6QL64 1941 aa13.2□□□□□ -0.3
RPS28-204ENST00000602140 TTC24A2A3L6 582 aaPredicted RBP13.2□□□□□ -0.3
RPS28-204ENST00000602140 CAPN8A6NHC0 703 aa13.2□□□□□ -0.3
RPS28-204ENST00000602140 TMX2-CTNND1H3BSU7 103 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms