RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RIMKLBQ9ULI2 386 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 SPO11Q9Y5K1 396 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 IKBKGQ9Y6K9 419 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 ANKRD36A6QL64 1941 aa22.68■■□□□ 1.22
IRF3-228ENST00000601291 A0A0J9YYE9 177 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 LDB2O43679 373 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 SIN3BO75182 1162 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 TRBC1P01850 177 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 NFKBIAP25963 317 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ABL2P42684 1182 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 MGAT5Q09328 741 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 NAB1Q13506 487 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 EFTUD2Q15029 972 aaKnown RBP eCLIP22.67■■□□□ 1.226e-7■■■■□ 23.8
IRF3-228ENST00000601291 TMEM196Q5HYL7 178 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 C9orf64Q5T6V5 341 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 PDPK2PQ6A1A2 396 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 KIAA0930Q6ICG6 404 aaPredicted RBP22.67■■□□□ 1.22
IRF3-228ENST00000601291 USP45Q70EL2 814 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 DSG4Q86SJ6 1040 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 RASSF3Q86WH2 238 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 LRRC6Q86X45 466 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 KCNV2Q8TDN2 545 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 PAFAH2Q99487 392 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 C20orf96Q9NUD7 363 aaPredicted RBP22.67■■□□□ 1.22
IRF3-228ENST00000601291 CACNA2D2Q9NY47 1150 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 HCN2Q9UL51 889 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ARL5AQ9Y689 179 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 STON1Q9Y6Q2 735 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 CAPN8A6NHC0 703 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 CTPS1P17812 591 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 MSH2P43246 934 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 KIR2DL1P43626 348 aaPredicted RBP22.67■■□□□ 1.22
IRF3-228ENST00000601291 SEC13P55735 322 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 SKIDA1Q1XH10 827 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 EMC10Q5UCC4 262 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ESRP1Q6NXG1 681 aaKnown RBP22.67■■□□□ 1.22
IRF3-228ENST00000601291 KCNMB4Q86W47 210 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 TDRPQ86YL5 185 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ADHFE1Q8IWW8 467 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 STK40Q8N2I9 435 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 HCAR2Q8TDS4 363 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 STYXQ8WUJ0 223 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ACOX2Q99424 681 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 TMBIM4Q9HC24 238 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 ZFATQ9P243 1243 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 PSMC3IPQ9P2W1 217 aaPredicted RBP22.67■■□□□ 1.22
IRF3-228ENST00000601291 ZNF711Q9Y462 761 aa22.67■■□□□ 1.22
IRF3-228ENST00000601291 MYLKQ15746 1914 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 GOLGA8KD6RF30 607 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 RGS16O15492 202 aaPredicted RBP22.66■■□□□ 1.22
IRF3-228ENST00000601291 SYF2O95926 243 aaKnown RBP22.66■■□□□ 1.22
IRF3-228ENST00000601291 C1QAP02745 245 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 CTSLP07711 333 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 TIE1P35590 1138 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 ENPP2Q13822 863 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 CNGA3Q16281 694 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 ZNF805Q5CZA5 627 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 FSTL4Q6MZW2 842 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 ZSWIM9Q86XI8 627 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 UNC5BQ8IZJ1 945 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 PPM1NQ8N819 430 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 TMIEQ8NEW7 156 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 MDGA1Q8NFP4 955 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 GABPB2Q8TAK5 448 aaPredicted RBP22.66■■□□□ 1.22
IRF3-228ENST00000601291 MRRFQ96E11 262 aaKnown RBP22.66■■□□□ 1.22
IRF3-228ENST00000601291 STMN4Q9H169 189 aaPredicted RBP22.66■■□□□ 1.22
IRF3-228ENST00000601291 PRDM6Q9NQX0 595 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 SLC2A6Q9UGQ3 507 aa22.66■■□□□ 1.22
IRF3-228ENST00000601291 TSPAN11A1L157 253 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 EGFP01133 1207 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 INHBAP08476 426 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 ALPIP09923 528 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 ERVK-10P10266 1014 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 LPOP22079 712 aaPredicted RBP22.65■■□□□ 1.22
IRF3-228ENST00000601291 RASA2Q15283 850 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 SLC44A4Q53GD3 710 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 SDE2Q6IQ49 451 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 TRMT11Q7Z4G4 463 aaKnown RBP22.65■■□□□ 1.22
IRF3-228ENST00000601291 EZH1Q92800 747 aaPredicted RBP22.65■■□□□ 1.22
IRF3-228ENST00000601291 PGM2Q96G03 612 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 GPR63Q9BZJ6 419 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 ZDHHC4Q9NPG8 344 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 DKK3Q9UBP4 350 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 DUSP12Q9UNI6 340 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 PPIL1Q9Y3C6 166 aa22.65■■□□□ 1.22
IRF3-228ENST00000601291 KPNA3O00505 521 aaPredicted RBP22.64■■□□□ 1.22
IRF3-228ENST00000601291 VAPBO95292 243 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 SLC4A1P02730 911 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 GCAP28676 217 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 ATP5DP30049 168 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 HNF1BP35680 557 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 ZNF140P52738 457 aaPredicted RBP22.64■■□□□ 1.22
IRF3-228ENST00000601291 PRAMEP78395 509 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 ACVR1Q04771 509 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 MARK2Q7KZI7 788 aaKnown RBP22.64■■□□□ 1.22
IRF3-228ENST00000601291 SLC26A11Q86WA9 606 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 OR13J1Q8NGT2 312 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 SLC44A1Q8WWI5 657 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 FAM3CQ92520 227 aa22.64■■□□□ 1.22
IRF3-228ENST00000601291 SCRN2Q96FV2 425 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms