RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 LRRC32Q14392 662 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 TAF1AQ15573 450 aaPredicted RBP15.52■□□□□ 0.08
UPF1-206ENST00000598471 ANKRD20A4Q4UJ75 823 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 C2orf27AQ580R0 203 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 TSTD2Q5T7W7 516 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 UBALD2Q8IYN6 164 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 IQCKQ8N0W5 287 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 GABPB2Q8TAK5 448 aaPredicted RBP15.52■□□□□ 0.08
UPF1-206ENST00000598471 PIP4K2CQ8TBX8 421 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 CDKL2Q92772 493 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 PEX13Q92968 403 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 ZIM3Q96PE6 472 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 CYTH2Q99418 400 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 GABRG3Q99928 467 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 PPCSQ9HAB8 311 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 MAGEE1Q9HCI5 957 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 PRSS16Q9NQE7 514 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 CHRAC1Q9NRG0 131 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 WNT16Q9UBV4 365 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 HCN2Q9UL51 889 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 RIMKLBQ9ULI2 386 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 CA14Q9ULX7 337 aa15.52■□□□□ 0.08
UPF1-206ENST00000598471 EXOC1LA0A1B0GW35 172 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 TCRBV9S1A1TA0A576 114 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 GOLGA6L10A6NI86 522 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 UPK3BL1B0FP48 263 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 UPK3BL2E5RIL1 263 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 KLF8O95600 359 aaPredicted RBP15.51■□□□□ 0.07
UPF1-206ENST00000598471 CTSLP07711 333 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 PIRTP0C851 137 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 CYP2A6P11509 494 aaPredicted RBP15.51■□□□□ 0.07
UPF1-206ENST00000598471 HOXB2P14652 356 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 CTPS1P17812 591 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ITGB7P26010 798 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 SLC8A1P32418 973 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ABL2P42684 1182 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 FAM193AP78312 1265 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 GPS2Q13227 327 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
UPF1-206ENST00000598471 CAMK2GQ13555 558 aaPredicted RBP15.51■□□□□ 0.07
UPF1-206ENST00000598471 LONRF1Q17RB8 773 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 SKIDA1Q1XH10 827 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 EOGTQ5NDL2 527 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ZNF449Q6P9G9 518 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 CYS1Q717R9 158 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 FBF1Q8TES7 1133 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 STYXQ8WUJ0 223 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 GPR63Q9BZJ6 419 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ACSS3Q9H6R3 686 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ZDHHC4Q9NPG8 344 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 PPM1HQ9ULR3 514 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 NDRG2Q9UN36 371 aaKnown RBP15.51■□□□□ 0.07
UPF1-206ENST00000598471 PPIL1Q9Y3C6 166 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 ZNF711Q9Y462 761 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 SPO11Q9Y5K1 396 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 FAM169AQ9Y6X4 670 aa15.51■□□□□ 0.07
UPF1-206ENST00000598471 MROH6A6NGR9 719 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 C16orf96A6NNT2 1141 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 DLL1O00548 723 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 RNF40O75150 1001 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 ADH1BP00325 375 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 IL1BP01584 269 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 PRKCGP05129 697 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 LPOP22079 712 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 NMBRP28336 390 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 PSMD8P48556 350 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 SUOXP51687 545 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 MGAT5Q09328 741 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 NAB1Q13506 487 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 CCINQ13939 588 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 UBAP2Q5T6F2 1119 aaKnown RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 IER5LQ5T953 404 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 ZNF776Q68DI1 518 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 PDPK2PQ6A1A2 396 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 KIAA0930Q6ICG6 404 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 ERAP2Q6P179 960 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 CES3Q6UWW8 571 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 ZSWIM9Q86XI8 627 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 SYNPOQ8N3V7 929 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 IL17RCQ8NAC3 791 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 TXNDC5Q8NBS9 432 aaKnown RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 OR2T3Q8NH03 318 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 VOPP1Q96AW1 172 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 MFSD3Q96ES6 412 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 SCRN2Q96FV2 425 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 CERS2Q96G23 380 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 MCCC1Q96RQ3 725 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 LYSMD1Q96S90 227 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 FAM129BQ96TA1 746 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 ROPN1BQ9BZX4 212 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 ROPN1Q9HAT0 212 aaPredicted RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 PPANQ9NQ55 473 aaKnown RBP15.5■□□□□ 0.07
UPF1-206ENST00000598471 MUTYHQ9UIF7 546 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 PKP3Q9Y446 797 aa15.5■□□□□ 0.07
UPF1-206ENST00000598471 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
UPF1-206ENST00000598471 C1orf232A0A0U1RR37 186 aa15.49■□□□□ 0.07
UPF1-206ENST00000598471 ZCWPW2A0A1B0GU75 182 aa15.49■□□□□ 0.07
UPF1-206ENST00000598471 CCDC78A2IDD5 438 aa15.49■□□□□ 0.07
UPF1-206ENST00000598471 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms