RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 COMTP21964 271 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 ACP1P24666 158 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 CYLC1P35663 651 aaPredicted RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 MAXP61244 160 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 ILKQ13418 452 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 MTM1Q13496 603 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 IHHQ14623 411 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 ZNF542PQ5EBM4 170 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 UNQ6494/PRO21346Q6UXR6 183 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 KDM7AQ6ZMT4 941 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 MACC1Q6ZN28 852 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 TMTC1Q8IUR5 882 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 FAM181AQ8N9Y4 354 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 KDF1Q8NAX2 398 aaPredicted RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 BTN2A2Q8WVV5 523 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 PIH1D2Q8WWB5 315 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 SCRN2Q96FV2 425 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 MCCC1Q96RQ3 725 aaPredicted RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 SEMA3CQ99985 751 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 CAAP1Q9H8G2 361 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 DNAJC28Q9NX36 388 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 NLGN3Q9NZ94 848 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 B4GALT6Q9UBX8 382 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 PNMA8BQ9ULN7 279 aaPredicted RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 ALG6Q9Y672 507 aa13.11□□□□□ -0.31
USE1-207ENST00000596136 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
USE1-207ENST00000596136 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 H3BM21 787 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 PSTPIP1O43586 416 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 LZTS3O60299 673 aaPredicted RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 RECQL5O94762 991 aaPredicted RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 NDUFA10O95299 355 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 MAP3K6O95382 1288 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 ELFN1P0C7U0 828 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 ZFXP17010 805 aaPredicted RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 JUNDP17535 347 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 NFKBIAP25963 317 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 TRIM23P36406 574 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 THOP1P52888 689 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 SEMG2Q02383 582 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 PPIDQ08752 370 aaKnown RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 INPP5AQ14642 412 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 SPA17Q15506 151 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 ARMC12Q5T9G4 340 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 CCDC13Q8IYE1 715 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 GALNT15Q8N3T1 639 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 ZNF548Q8NEK5 533 aaPredicted RBP13.1□□□□□ -0.31
USE1-207ENST00000596136 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 IL12RB2Q99665 862 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 APOOQ9BUR5 198 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 HAUS2Q9NVX0 235 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.31
USE1-207ENST00000596136 KCTD5Q9NXV2 234 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 RAI2Q9Y5P3 530 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 ZZEF1O43149 2961 aa13.1□□□□□ -0.31
USE1-207ENST00000596136 ASXL3Q9C0F0 2248 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 LY6G6EA0A0G2JKS1 128 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 BTNL10A8MVZ5 291 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 K7ESM1 405 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 PSMD11O00231 422 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 TPP1O14773 563 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 APOL1O14791 398 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 AQP9O43315 295 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 SPOPO43791 374 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 RFPL3O75679 317 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
USE1-207ENST00000596136 CPP00450 1065 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 PRLP01236 227 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 PDHA1P08559 390 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 ALPPL2P10696 532 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 CKMT1AP12532 417 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 VIPR1P32241 457 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 CDKN2BP42772 138 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 IFI35P80217 286 aaPredicted RBP13.09□□□□□ -0.31
USE1-207ENST00000596136 NFATC4Q14934 902 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 ZFYVE27Q5T4F4 411 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 ESRP1Q6NXG1 681 aaKnown RBP13.09□□□□□ -0.31
USE1-207ENST00000596136 MFSD7Q6UXD7 560 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 CACTIN-AS1Q8N1I8 211 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 CNTD1Q8N815 330 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 PLA2G15Q8NCC3 412 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 CALR3Q96L12 384 aaKnown RBP13.09□□□□□ -0.31
USE1-207ENST00000596136 LGMNQ99538 433 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 MAK16Q9BXY0 300 aaKnown RBP13.09□□□□□ -0.31
USE1-207ENST00000596136 BRD8Q9H0E9 1235 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 USP29Q9HBJ7 922 aa13.09□□□□□ -0.31
USE1-207ENST00000596136 LUC7LQ9NQ29 371 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms