RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ARHGEF37A1IGU5 675 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 FGF10O15520 208 aaPredicted RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 B3GAT3O94766 335 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 H6PDO95479 791 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 POMCP01189 267 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 ODC1P11926 461 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CCR1P32246 355 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CPT1AP50416 773 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 MAXP61244 160 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CCL14Q16627 93 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 FAM110CQ1W6H9 321 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 ARTNQ5T4W7 220 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 MANEALQ5VSG8 457 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CLEC6AQ6EIG7 209 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CYP2R1Q6VVX0 501 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CARM1Q86X55 608 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 LZTR1Q8N653 840 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 OR9I1Q8NGQ6 314 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 LIN28AQ9H9Z2 209 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 EML4Q9HC35 981 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 OLAHQ9NV23 265 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 SUCOQ9UBS9 1254 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 HEMK1Q9Y5R4 338 aaPredicted RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 PRORSD1PA6NEY8 169 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 C8BP07358 591 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 NELFEP18615 380 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 YWHAQP27348 245 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 PSMD8P48556 350 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 CDK9P50750 372 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 ITKQ08881 620 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 AFAP1L2Q8N4X5 818 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 KLHL23Q8NBE8 558 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 OR10T2Q8NGX3 314 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 FAR2Q96K12 515 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 SLC29A1Q99808 456 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 OSBPL11Q9BXB4 747 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 PRKD2Q9BZL6 878 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 AP5M1Q9H0R1 490 aa16.57■□□□□ 0.24
LIG1-206ENST00000594067 IPO11Q9UI26 975 aaKnown RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
LIG1-206ENST00000594067 TTC24A2A3L6 582 aaPredicted RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 HEATR9A2RTY3 570 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 H3BNH8 94 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 ZSCAN9O15535 394 aaPredicted RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 IMPDH2P12268 514 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 HOXC13P31276 330 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 BRMS1LQ5PSV4 323 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 HECTD2Q5U5R9 776 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 TRIM74Q86UV6 250 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 METTL23Q86XA0 190 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 PTPN18Q99952 460 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 ACBD6Q9BR61 282 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 SPON1Q9HCB6 807 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 CPA4Q9UI42 421 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 CENPFP49454 3210 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 E9PAM4 449 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 UBFD1O14562 309 aaKnown RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 TRIM24O15164 1050 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 SNRPB2P08579 225 aaKnown RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 KCNC1P48547 511 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 RHDQ02161 417 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 TIGD7Q6NT04 549 aaPredicted RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 KDELC1Q6UW63 502 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 RIN3Q8TB24 985 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 SH3RF2Q8TEC5 729 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 ALG9Q9H6U8 611 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 CAAP1Q9H8G2 361 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 FBRSL1Q9HCM7 1045 aaKnown RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 NT5MQ9NPB1 228 aa16.56■□□□□ 0.24
LIG1-206ENST00000594067 GMPR2Q9P2T1 348 aaKnown RBP16.56■□□□□ 0.24
LIG1-206ENST00000594067 M0QZ92 97 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 MRASO14807 208 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 LEPRP48357 1165 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 CLCN5P51795 746 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 NDST2P52849 883 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 SLC5A3P53794 718 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 PSMD5Q16401 504 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 IL31Q6EBC2 164 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 DUS1LQ6P1R4 473 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 KIAA0408Q6ZU52 694 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 RBM12BQ8IXT5 1001 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 MYO1HQ8N1T3 1032 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 CCDC126Q96EE4 140 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 KLHL5Q96PQ7 755 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 SLC39A3Q9BRY0 314 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 GSTO2Q9H4Y5 243 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 ABCC13Q9NSE7 274 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 TRAF6Q9Y4K3 522 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 SNX13Q9Y5W8 968 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 HS3ST4Q9Y661 456 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 SUPT7LO94864 414 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms