RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 HMGB4Q8WW32 186 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 OR8D1Q8WZ84 308 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 GDAP1L1Q96MZ0 367 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 PPP1R2P1Q96PQ5 205 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 TM6SF2Q9BZW4 377 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 VIPAS39Q9H9C1 493 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 HAUS2Q9NVX0 235 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 BCCIPQ9P287 314 aaKnown RBP eCLIP12.01□□□□□ -0.49
DDX39A-219ENST00000592927 FAM153AQ9UHL3 310 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
DDX39A-219ENST00000592927 KCNK1O00180 336 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 EIF3HO15372 352 aaKnown RBP eCLIP12□□□□□ -0.49
DDX39A-219ENST00000592927 PPFIA2O75334 1257 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF821O75541 412 aaPredicted RBP12□□□□□ -0.49
DDX39A-219ENST00000592927 IGSF6O95976 241 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 CCNB1P14635 433 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 TPSB2P20231 275 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PTPN3P26045 913 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 MMP13P45452 471 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 BASP1P80723 227 aaKnown RBP12□□□□□ -0.49
DDX39A-219ENST00000592927 CBLBQ13191 982 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 SEMA5AQ13591 1074 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 KCNJ11Q14654 390 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 CASP8Q14790 479 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 TPSAB1Q15661 275 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PMS2CLQ68D20 193 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 ANO7Q6IWH7 933 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 B4GALNT4Q76KP1 1039 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 TMC3Q7Z5M5 1100 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 DSG4Q86SJ6 1040 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 TMPRSS6Q8IU80 811 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 RELL1Q8IUW5 271 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PLPP6Q8IY26 295 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF567Q8N184 647 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 OR2AP1Q8NGE2 309 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 OR2A12Q8NGT7 310 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 CPT1BQ92523 772 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 MAML1Q92585 1016 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PIGKQ92643 395 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PRCCQ92733 491 aaPredicted RBP12□□□□□ -0.49
DDX39A-219ENST00000592927 PKNOX2Q96KN3 472 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 PSKH2Q96QS6 385 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 FUT8Q9BYC5 575 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 ACBD3Q9H3P7 528 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 CD248Q9HCU0 757 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 RBM22Q9NW64 420 aaKnown RBP eCLIP12□□□□□ -0.492e-6■□□□□ 10.6
DDX39A-219ENST00000592927 SEPT10Q9P0V9 454 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 KLHL8Q9P2G9 620 aaPredicted RBP12□□□□□ -0.49
DDX39A-219ENST00000592927 HECAQ9UBI9 543 aaPredicted RBP12□□□□□ -0.49
DDX39A-219ENST00000592927 LHX3Q9UBR4 397 aa12□□□□□ -0.49
DDX39A-219ENST00000592927 GOLGA6CA6NDK9 693 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 GOLGA6BA6NDN3 693 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ERI2A8K979 691 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 UPK3BL1B0FP48 263 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 UPK3BL2E5RIL1 263 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 J3QKU1 62 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MAP2K7O14733 419 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ALOX15BO15296 676 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 PSMD3O43242 534 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 POP4O95707 220 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 IL1BP01584 269 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 JCHAINP01591 159 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 GOLGA6DP0CG33 693 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 GABRG2P18507 467 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 CCNHP51946 323 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 COPAP53621 1224 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 SARNPP82979 210 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 RAD51Q06609 339 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 DHX9Q08211 1270 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 NSUN2Q08J23 767 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MYLK3Q32MK0 819 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TRIM61Q5EBN2 209 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF776Q68DI1 518 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 KIAA1324Q6UXG2 1013 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 DPY19L3Q6ZPD9 716 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TRMT10CQ7L0Y3 403 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 PID1Q7Z2X4 250 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MMAAQ8IVH4 418 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TEX26Q8N6G2 289 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TSEN2Q8NCE0 465 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MCUQ8NE86 351 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MDGA1Q8NFP4 955 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MRGPRX1Q96LB2 322 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TEKT5Q96M29 485 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 FAM129BQ96TA1 746 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 IL12RB2Q99665 862 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 HEPHQ9BQS7 1158 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 NUSAP1Q9BXS6 441 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 TXLNGYQ9BZA5 131 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MKRN2Q9H000 416 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 RSPH9Q9H1X1 276 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 NT5MQ9NPB1 228 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 EIF2B3Q9NR50 452 aaKnown RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF446Q9NWS9 450 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 GOLGA6AQ9NYA3 693 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms