RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 AKAP10O43572 662 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 MYF6P23409 242 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 RBM20Q5T481 1227 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 NEPROQ6NW34 567 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 LAYNQ6UX15 382 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 AQP12AQ8IXF9 295 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF419Q96HQ0 510 aaPredicted RBP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 UBXN10Q96LJ8 280 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 OSBPL6Q9BZF3 934 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 PRKD2Q9BZL6 878 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 GSTO2Q9H4Y5 243 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 PLGRKTQ9HBL7 147 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 BBIP1A8MTZ0 92 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 AURKAO14965 403 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ATP6V1B2P21281 511 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 CDH15P55291 814 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 NME5P56597 212 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ACAP2Q15057 778 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 UBXN11Q5T124 520 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 GPR141Q7Z602 305 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 CAMK1DQ8IU85 385 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ARHGAP12Q8IWW6 846 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 GOLM1Q8NBJ4 401 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 PCYOX1LQ8NBM8 494 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 PPP1R2P1Q96PQ5 205 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 OLFM1Q99784 485 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 ABCD2Q9UBJ2 740 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 HEMK1Q9Y5R4 338 aaPredicted RBP14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 TLL2Q9Y6L7 1015 aa14.93□□□□□ -0.02
SMARCA4-219ENST00000592604 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 MMP3P08254 477 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 IMPDH1P20839 514 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 GRIA3P42263 894 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 ESRRGP62508 458 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 RANBP10Q6VN20 620 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 RPS27LQ71UM5 84 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 FAM35AQ86V20 835 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 HOPXQ9BPY8 73 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 ARHGEF38Q9NXL2 777 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 SPATA7Q9P0W8 599 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 NEU3Q9UQ49 428 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF510Q9Y2H8 683 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 HHLA1C9JL84 531 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 UBFD1O14562 309 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 GPX3P22352 226 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 YWHAQP27348 245 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 IREB2P48200 963 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 LEPRP48357 1165 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 TMED1Q13445 227 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 GPR180Q86V85 440 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 TNIP2Q8NFZ5 429 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 ISOC1Q96CN7 298 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 TMEM30AQ9NV96 361 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 TBCCD1Q9NVR7 557 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 SMOXQ9NWM0 555 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 CDH7Q9ULB5 785 aa14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 PIN4Q9Y237 131 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-219ENST00000592604 SH3PXD2BA1X283 911 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 MATN3O15232 486 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 CLCN5P51795 746 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 MAP7D1Q3KQU3 841 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 DUS1LQ6P1R4 473 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 RETREG3Q86VR2 466 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 EDEM1Q92611 657 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 L3HYPDHQ96EM0 354 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 HSPBAP1Q96EW2 488 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 MAP10Q9P2G4 905 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 COL4A4P53420 1690 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 SMIM35A0A1B0GVV1 85 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 DFFAO00273 331 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 MAFKO60675 156 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 CYP2C18P33260 490 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 STT3AP46977 705 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 ATP6V0D1P61421 351 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 UGT3A2Q3SY77 523 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF789Q5FWF6 425 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 PRMT9Q6P2P2 845 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 Q6ZNX1 250 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 RNF135Q8IUD6 432 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 CBR4Q8N4T8 237 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 ATPAF2Q8N5M1 289 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 LZTR1Q8N653 840 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 SNX31Q8N9S9 440 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 ARRDC4Q8NCT1 418 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 FAM110BQ8TC76 370 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 ABTB1Q969K4 478 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 PHF21BQ96EK2 531 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 TSPAN17Q96FV3 270 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC45A3Q96JT2 553 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 MRGPRX2Q96LB1 330 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC39A3Q9BRY0 314 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 AGPAT4Q9NRZ5 378 aa14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 GMPR2Q9P2T1 348 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-219ENST00000592604 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms