RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-210	ENST00000589990	SLC47A2	Q86VL8	602 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	NRROS	Q86YC3	692 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	SPATA20	Q8TB22	786 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	PTCD2	Q8WV60	388 aa	Known RBP	12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	GSDMA	Q96QA5	445 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	HAPLN3	Q96S86	360 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	CTRC	Q99895	268 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	TTYH3	Q9C0H2	523 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	B3GNT4	Q9C0J1	378 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	CDH19	Q9H159	772 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	NOL6	Q9H6R4	1146 aa	Known RBP	12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	CYP4F12	Q9HCS2	524 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	STAP1	Q9ULZ2	295 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	TP53TG5	Q9Y2B4	290 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990	ST14	Q9Y5Y6	855 aa		12.85	□□□□□ -0.35
PRKCSH-210	ENST00000589990		A1L4Q6	167 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	HGS	O14964	777 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	FUCA1	P04066	466 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	FGF1	P05230	155 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	GM2A	P17900	193 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	GNLY	P22749	145 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	COL8A1	P27658	744 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	CLCN1	P35523	988 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	STX17	P56962	302 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	LACTB2	Q53H82	288 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	RWDD4	Q6NW29	188 aa	Known RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	TIPARP	Q7Z3E1	657 aa	Known RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	ZNF438	Q7Z4V0	828 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	PHLDB2	Q86SQ0	1253 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	C17orf82	Q86X59	251 aa	Predicted RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	XYLT1	Q86Y38	959 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	OR56A4	Q8NGH8	313 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	SHC3	Q92529	594 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	HMCES	Q96FZ2	354 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	SLC45A3	Q96JT2	553 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	GDAP1L1	Q96MZ0	367 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	SPRY4	Q9C004	299 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	SLC39A1	Q9NY26	324 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	RRN3	Q9NYV6	651 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	PPARGC1A	Q9UBK2	798 aa	Known RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	DKK3	Q9UBP4	350 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	MOSPD1	Q9UJG1	213 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	PILRA	Q9UKJ1	303 aa		12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	MRPS18B	Q9Y676	258 aa	Known RBP	12.84	□□□□□ -0.35
PRKCSH-210	ENST00000589990	PPP1R3G	B7ZBB8	358 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GOLGA8S	H3BPF8	625 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PSMA7	O14818	248 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	BUB1	O43683	1085 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	BUB1B	O60566	1050 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SEMA7A	O75326	666 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ECEL1	O95672	775 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	F9	P00740	461 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	AK4	P27144	223 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MMP12	P39900	470 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	LIMK2	P53671	638 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ATP11A	P98196	1134 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RALGDS	Q12967	914 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MTM1	Q13496	603 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	UGP2	Q16851	508 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZNF787	Q6DD87	383 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	EMC1	Q8N766	993 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	BMPER	Q8N8U9	685 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GPBAR1	Q8TDU6	330 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NELFB	Q8WX92	580 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SMARCE1	Q969G3	411 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CATSPER2	Q96P56	530 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	AKAP7	Q9P0M2	348 aa	Predicted RBP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	LHX3	Q9UBR4	397 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MAN1B1	Q9UKM7	699 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CTNND2	Q9UQB3	1225 aa		12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
PRKCSH-210	ENST00000589990	FBN2	P35556	2912 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	DOPEY1	Q5JWR5	2465 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ENO4	A6NNW6	628 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	EFCAB7	A8K855	629 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RHPN2P1	A8MT19	583 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PPM1D	O15297	605 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KDELR3	O43731	214 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RAMP2	O60895	175 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RECQL5	O94762	991 aa	Predicted RBP	12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	LRIG2	O94898	1065 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	AGFG2	O95081	481 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	IGSF6	O95976	241 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	THRA	P10827	490 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	XPA	P23025	273 aa	Predicted RBP	12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KIAA1024L	P59773	190 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RHOA	P61586	193 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KLRB1	Q12918	225 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NR1D2	Q14995	579 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	AGER	Q15109	404 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CYTH1	Q15438	398 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	C16orf46	Q6P387	395 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ATCAY	Q86WG3	371 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZNF761	Q86XN6	746 aa	Predicted RBP	12.82	□□□□□ -0.36

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