RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 TICRRQ7Z2Z1 1910 aa25.64■■□□□ 1.7
CAPNS1-204ENST00000587718 IGLV3-10A0A075B6K4 115 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 DFFAO00273 331 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 CHRNB1P11230 501 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 COL6A2P12110 1019 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 ADRA1AP35348 466 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 CSTF1Q05048 431 aaKnown RBP25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 HNRNPDQ14103 355 aaKnown RBP25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 CERCAMQ5T4B2 595 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 WLSQ5T9L3 541 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 CMTM8Q8IZV2 173 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 ZBTB44Q8NCP5 570 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 GABPB2Q8TAK5 448 aaPredicted RBP25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 ZFYVE19Q96K21 471 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 LMAN1LQ9HAT1 526 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 ARNT2Q9HBZ2 717 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 TMEM248Q9NWD8 314 aa25.64■■□□□ 1.69
CAPNS1-204ENST00000587718 MYO16Q9Y6X6 1858 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 FGF3P11487 239 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 SERPINB3P29508 390 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 KPNA1P52294 538 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 TBX4P57082 545 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 TRIP4Q15650 581 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 DDR2Q16832 855 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 SDHAF4Q5VUM1 108 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 ZNF683Q8IZ20 524 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 KIF2BQ8N4N8 673 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 SUMF1Q8NBK3 374 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 PPHLN1Q8NEY8 458 aaKnown RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 OR6Y1Q8NGX8 325 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 BPIFB1Q8TDL5 484 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 CSGALNACT1Q8TDX6 532 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 STON2Q8WXE9 905 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 MSANTD3Q96H12 275 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 GCNAQ96QF7 691 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 GPR22Q99680 433 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 MECRQ9BV79 373 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 MMADHCQ9H3L0 296 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 RHOJQ9H4E5 214 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 C8orf33Q9H7E9 229 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 VPS45Q9NRW7 570 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 C20orf96Q9NUD7 363 aaPredicted RBP25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 COPG2Q9UBF2 871 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 SFMBT1Q9UHJ3 866 aa25.63■■□□□ 1.69
CAPNS1-204ENST00000587718 USP12O75317 370 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 PAMP19021 973 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 SOX9P48436 509 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 RING1Q06587 406 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 PCLAFQ15004 111 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 FSTL4Q6MZW2 842 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 MYRFLQ96LU7 910 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 TBC1D10AQ9BXI6 508 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 SMG9Q9H0W8 520 aaKnown RBP25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 SLC25A51Q9H1U9 297 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 GTSE1Q9NYZ3 720 aa25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 NUP210Q8TEM1 1887 aaPredicted RBP25.62■■□□□ 1.69
CAPNS1-204ENST00000587718 GVINP1Q7Z2Y8 2422 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 SLC38A8A6NNN8 435 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 SOBPA7XYQ1 873 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TMEM114B3SHH9 223 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 ATP9BO43861 1147 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 ALOX15P16050 662 aaPredicted RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 YWHAQP27348 245 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 HARS2P49590 506 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 RENBPP51606 427 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 HK2P52789 917 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 RPL10AP62906 217 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 PREPLQ4J6C6 727 aaPredicted RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TXNDC11Q6PKC3 985 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 CELF5Q8N6W0 485 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 PIWIL2Q8TC59 973 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 PPP4R1Q8TF05 950 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 UTP4Q969X6 686 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TRMT2BQ96GJ1 504 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 BTN2A3PQ96KV6 586 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 RANBP9Q96S59 729 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 BTBD10Q9BSF8 475 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 IER2Q9BTL4 223 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 ZYG11BQ9C0D3 744 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 PIH1D1Q9NWS0 290 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 PCDHGA2Q9Y5H1 932 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 FCHO1O14526 889 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TDGF1P13385 188 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 EZRP15311 586 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 DDX6P26196 483 aaKnown RBP eCLIP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TSSK4Q6SA08 328 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 MAB21L3Q8N8X9 362 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 MFSD3Q96ES6 412 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 CDK5RAP1Q96SZ6 601 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TLR8Q9NR97 1041 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 RBM22Q9NW64 420 aaKnown RBP eCLIP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 ZSCAN32Q9NX65 697 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 IPO11Q9UI26 975 aaKnown RBP25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 TRIM33Q9UPN9 1127 aa25.61■■□□□ 1.69
CAPNS1-204ENST00000587718 SPECC1L-ADORA2AF8WAN1 911 aa25.6■■□□□ 1.69
CAPNS1-204ENST00000587718 MSI1O43347 362 aaKnown RBP25.6■■□□□ 1.69
CAPNS1-204ENST00000587718 LILRB5O75023 590 aa25.6■■□□□ 1.69
CAPNS1-204ENST00000587718 PRKCGP05129 697 aa25.6■■□□□ 1.69
CAPNS1-204ENST00000587718 SERPINA6P08185 405 aa25.6■■□□□ 1.69
CAPNS1-204ENST00000587718 CPA3P15088 417 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms