RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 IL1RAPL1Q9NZN1 696 aa18.64■□□□□ 0.57
RETREG3-205ENST00000586870 TCAF1Q9Y4C2 921 aa18.64■□□□□ 0.57
RETREG3-205ENST00000586870 NUP210Q8TEM1 1887 aaPredicted RBP18.64■□□□□ 0.57
RETREG3-205ENST00000586870 OBSL1O75147 1896 aa18.64■□□□□ 0.57
RETREG3-205ENST00000586870 GREM1O60565 184 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 PRAMEF11O60813 436 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 TYK2P29597 1187 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 SCTRP47872 440 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 SERPINB8P50452 374 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 CDH4P55283 916 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 ITKQ08881 620 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 GRSF1Q12849 480 aaKnown RBP eCLIP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 PDE1CQ14123 709 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 PON2Q15165 354 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 FAM133BQ5BKY9 247 aaKnown RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 TMEM25Q86YD3 366 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 DCLK2Q8N568 766 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 AGAP2Q99490 1192 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 P2RY13Q9BPV8 354 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 DDX50Q9BQ39 737 aaKnown RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 LRFN3Q9BTN0 628 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 BBS2Q9BXC9 721 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 MAGEH1Q9H213 219 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 ATP13A1Q9HD20 1204 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 LTB4R2Q9NPC1 389 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 IARS2Q9NSE4 1012 aaKnown RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 SIRPGQ9P1W8 387 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 MPOP05164 745 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 BPGMP07738 259 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 PAMP19021 973 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 SLC6A4P31645 630 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 LBRQ14739 615 aaKnown RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 SPRED3Q2MJR0 410 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 GALNTL6Q49A17 601 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 TMCO4Q5TGY1 634 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 CIR1Q86X95 450 aaPredicted RBP18.63■□□□□ 0.57
RETREG3-205ENST00000586870 NUDCD3Q8IVD9 361 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 C10orf82Q8WW14 230 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 BHMTQ93088 406 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 TADA1Q96BN2 335 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 MYEOVQ96EZ4 313 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 RANBP9Q96S59 729 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 MCMBPQ9BTE3 642 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 CAPN7Q9Y6W3 813 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 ANAPC1Q9H1A4 1944 aa18.63■□□□□ 0.57
RETREG3-205ENST00000586870 DENND4CQ5VZ89 1909 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 NEDD8-MDP1E9PL57 170 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 DCTN3O75935 186 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 LATS1O95835 1130 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 AOC1P19801 751 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 ACVRL1P37023 503 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 GALK1P51570 392 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 POU6F1Q14863 301 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 UGP2Q16851 508 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 ADGRF1Q5T601 910 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 TXNDC11Q6PKC3 985 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 NAT16Q8N8M0 369 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 PJA1Q8NG27 643 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 DDI1Q8WTU0 396 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 RMDN2Q96LZ7 410 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 TRIM55Q9BYV6 548 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 SNX15Q9NRS6 342 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 SLC12A4Q9UP95 1085 aa18.62■□□□□ 0.57
RETREG3-205ENST00000586870 MTF2Q9Y483 593 aaPredicted RBP18.62■□□□□ 0.57
RETREG3-205ENST00000586870 TSPAN3O60637 253 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 SIN3BO75182 1162 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 CLDN11O75508 207 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 DNAJC8O75937 253 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-205ENST00000586870 UBOX5O94941 541 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 MMP2P08253 660 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 TARSP26639 723 aaKnown RBP18.61■□□□□ 0.57
RETREG3-205ENST00000586870 CD86P42081 329 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 DSC2Q02487 901 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 GNA12Q03113 381 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 LRRC32Q14392 662 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 SETDB1Q15047 1291 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 PREPLQ4J6C6 727 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-205ENST00000586870 KIAA0930Q6ICG6 404 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-205ENST00000586870 FSTL4Q6MZW2 842 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 CHST9Q7L1S5 443 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 CNTN4Q8IWV2 1026 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 BBS5Q8N3I7 341 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 ARRDC2Q8TBH0 407 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 ZNF778Q96MU6 729 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 RASSF4Q9H2L5 321 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 LMAN1LQ9HAT1 526 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 PDFQ9HBH1 243 aa18.61■□□□□ 0.57
RETREG3-205ENST00000586870 HEATR9A2RTY3 570 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 TYW5A2RUC4 315 aaKnown RBP18.6■□□□□ 0.57
RETREG3-205ENST00000586870 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.6■□□□□ 0.57
RETREG3-205ENST00000586870 PI15O43692 258 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 PLIN3O60664 434 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 DCNP07585 359 aaKnown RBP18.6■□□□□ 0.57
RETREG3-205ENST00000586870 TYRP14679 529 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 POLD2P49005 469 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 SERPINH1P50454 418 aaKnown RBP18.6■□□□□ 0.57
RETREG3-205ENST00000586870 MAXP61244 160 aa18.6■□□□□ 0.57
RETREG3-205ENST00000586870 SMAD1Q15797 465 aaKnown RBP18.6■□□□□ 0.57
RETREG3-205ENST00000586870 PCSK7Q16549 785 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms