RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 DUSP15Q9H1R2 295 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PCDH12Q9NPG4 1184 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 RXFP3Q9NSD7 469 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PAK5Q9P286 719 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 SUSD2Q9UGT4 822 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 MBD1Q9UIS9 605 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 DRG1Q9Y295 367 aaKnown RBP13.95□□□□□ -0.18
TRAF4-215ENST00000584944 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
TRAF4-215ENST00000584944 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 AP1G1O43747 822 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 LZTS3O60299 673 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PHF2O75151 1096 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 GCATO75600 419 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 ELFN1P0C7U0 828 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 TIMP2P16035 220 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PSMB4P28070 264 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 NUDT1P36639 197 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 CCR5P51681 352 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 SKOR1P84550 965 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 CKAP4Q07065 602 aaKnown RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 SLC14A2Q15849 920 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 AASDHQ4L235 1098 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PMS2CLQ68D20 193 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 DENND2CQ68D51 928 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 NYAP1Q6ZVC0 841 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 RABEPKQ7Z6M1 372 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 HORMAD1Q86X24 394 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PRELID2Q8N945 189 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 PIGKQ92643 395 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 ZNF419Q96HQ0 510 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 TDRD1Q9BXT4 1180 aaKnown RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 C6orf106Q9H6K1 298 aaPredicted RBP13.94□□□□□ -0.18
TRAF4-215ENST00000584944 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 AASDHPPTQ9NRN7 309 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
TRAF4-215ENST00000584944 ABCA7Q8IZY2 2146 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 LAMA1P25391 3075 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 TSPAN11A1L157 253 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 METTL12A8MUP2 240 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 A8MX80 341 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 TRAFD1O14545 582 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 HTRA2O43464 458 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 ECEL1O95672 775 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 MT-CYBP00156 380 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 CTPS1P17812 591 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 FDFT1P37268 417 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 GRIA4P48058 902 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 FNTAP49354 379 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 WNT3AP56704 352 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 BASP1P80723 227 aaKnown RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 ACOX1Q15067 660 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 TEAD4Q15561 434 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 OASLQ15646 514 aaKnown RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 C12orf50Q8NA57 414 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 MLPHQ9BV36 600 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 RAB6BQ9NRW1 208 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 EIF2B4Q9UI10 523 aaKnown RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
TRAF4-215ENST00000584944 FADS3Q9Y5Q0 445 aa13.93□□□□□ -0.18
TRAF4-215ENST00000584944 CCDC188H7C350 402 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 RIOK3O14730 519 aaKnown RBP13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SLC31A1O15431 190 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 MMP20O60882 483 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 KRT37O76014 449 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 TM7SF2O76062 418 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 NDST3O95803 873 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SLC4A1P02730 911 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 PRKCGP05129 697 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 CFIP05156 583 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 C7P10643 843 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 CD27P26842 260 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 AKT2P31751 481 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 VIPR1P32241 457 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 CD68P34810 354 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-215ENST00000584944 COILP38432 576 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-215ENST00000584944 MPLP40238 635 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 ABL2P42684 1182 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 PTGER3P43115 390 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 KCNJ1P48048 391 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 GDF10P55107 478 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 GALNT3Q14435 633 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 STAT4Q14765 748 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SIX1Q15475 284 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-215ENST00000584944 PPP1R21Q6ZMI0 780 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 LINC00523Q86TU6 105 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 CREG2Q8IUH2 290 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SYT12Q8IV01 421 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 KLHL7Q8IXQ5 586 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 SLC25A41Q8N5S1 370 aa13.92□□□□□ -0.18
TRAF4-215ENST00000584944 BIRC7Q96CA5 298 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms