RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	GDAP1L1	Q96MZ0	367 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	SPSB2	Q99619	263 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	SLC12A9	Q9BXP2	914 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	TTYH3	Q9C0H2	523 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	PLCB1	Q9NQ66	1216 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	NDFIP2	Q9NV92	336 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	MAP10	Q9P2G4	905 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	KL	Q9UEF7	1012 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	OR12D3	Q9UGF7	316 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	DNAI1	Q9UI46	699 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	TUBD1	Q9UJT1	453 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	MFHAS1	Q9Y4C4	1052 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	DGKB	Q9Y6T7	804 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	RNF215	Q9Y6U7	377 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	ESPL1	Q14674	2120 aa		8.81	□□□□□ -1
NUP85-223	ENST00000583877	HIVEP3	Q5T1R4	2406 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	FAM170A	A1A519	330 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	CLEC18A	A5D8T8	446 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	STMND1	H3BQB6	276 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	FOXN3	O00409	490 aa	Predicted RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	KDELR3	O43731	214 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	NUDT21	O43809	227 aa	Known RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	IGSF6	O95976	241 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	FBXO45	P0C2W1	286 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	RHOQ	P17081	205 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	ITIH2	P19823	946 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	PON1	P27169	355 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	BPIFB4	P59827	614 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	COPS2	P61201	443 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	KCNAB2	Q13303	367 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	MTM1	Q13496	603 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	ARHGEF7	Q14155	803 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	INPP5A	Q14642	412 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	MSS51	Q4VC12	460 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	C14orf28	Q4W4Y0	310 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	PHF19	Q5T6S3	580 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TRNP1	Q6NT89	227 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	RWDD4	Q6NW29	188 aa	Known RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	CLEC18B	Q6UXF7	455 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	THSD4	Q6ZMP0	1018 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	LEKR1	Q6ZMV7	388 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TMPRSS9	Q7Z410	1059 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	FAM71A	Q8IYT1	594 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	CLEC18C	Q8NCF0	446 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	FAM46D	Q8NEK8	389 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	HCAR2	Q8TDS4	363 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	CASKIN2	Q8WXE0	1202 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	CFAP57	Q96MR6	1250 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	WDR92	Q96MX6	357 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	UCN2	Q96RP3	112 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	EPN3	Q9H201	632 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TMEM248	Q9NWD8	314 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	AKAP7	Q9P0M2	348 aa	Predicted RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	LRIT1	Q9P2V4	623 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TMEM59L	Q9UK28	342 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	AJAP1	Q9UKB5	411 aa	Predicted RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	COQ6	Q9Y2Z9	468 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	OR1A2	Q9Y585	309 aa		8.8	□□□□□ -1
NUP85-223	ENST00000583877	TEP1	Q99973	2627 aa	Known RBP	8.8	□□□□□ -1
NUP85-223	ENST00000583877	TNRC6A	Q8NDV7	1962 aa	Known RBP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	BUB1	O43683	1085 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	RAMP2	O60895	175 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	TMCC1	O94876	653 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	CPNE6	O95741	557 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	XPA	P23025	273 aa	Predicted RBP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	ADRA1B	P35368	520 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	ATP1A2	P50993	1020 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	POLE2	P56282	527 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	B4GALNT1	Q00973	533 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	HLTF	Q14527	1009 aa	Known RBP eCLIP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	C16orf72	Q14CZ0	275 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	CLPP	Q16740	277 aa	Predicted RBP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	INO80D	Q53TQ3	878 aa	Predicted RBP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	KCTD16	Q68DU8	428 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	NYAP1	Q6ZVC0	841 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	TAF8	Q7Z7C8	310 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	PIM3	Q86V86	326 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	ZNF354C	Q86Y25	554 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	PTRH1	Q86Y79	214 aa	Known RBP	8.79	□□□□□ -1
NUP85-223	ENST00000583877	IRF2BP1	Q8IU81	584 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	MSANTD4	Q8NCY6	345 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	OR56A4	Q8NGH8	313 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	GPBAR1	Q8TDU6	330 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	NKD1	Q969G9	470 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	PDXP	Q96GD0	296 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	SEMA6C	Q9H3T2	930 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	SIX2	Q9NPC8	291 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	DNAJC12	Q9UKB3	198 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	NEU3	Q9UQ49	428 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	MED13	Q9UHV7	2174 aa		8.79	□□□□□ -1
NUP85-223	ENST00000583877	SHANK1	Q9Y566	2161 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	TSPAN11	A1L157	253 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	CFAP69	A5D8W1	941 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	TMEM202	A6NGA9	273 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877		B4DGG1	531 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	FAM72C	H0Y354	149 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	GOLGA8S	H3BPF8	625 aa		8.78	□□□□□ -1
NUP85-223	ENST00000583877	CACNB4	O00305	520 aa	Predicted RBP	8.78	□□□□□ -1
NUP85-223	ENST00000583877	BIN1	O00499	593 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms