RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CCNB1P14635 433 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 TIMP2P16035 220 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 MAT2AP31153 395 aaKnown RBP25.06■■□□□ 1.6
TSEN54-209ENST00000583454 GSE1Q14687 1217 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 RALGPS1Q5JS13 557 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 BBS12Q6ZW61 710 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 CAMK1DQ8IU85 385 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 LRRN4Q8WUT4 740 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 HES6Q96HZ4 224 aa25.06■■□□□ 1.6
TSEN54-209ENST00000583454 SAE1Q9UBE0 346 aaPredicted RBP25.06■■□□□ 1.6
TSEN54-209ENST00000583454 TDRD6O60522 2096 aaKnown RBP25.05■■□□□ 1.6
TSEN54-209ENST00000583454 TRABD2BA6NFA1 517 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 ENC1O14682 589 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 AREL1O15033 823 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 YKT6O15498 198 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 DDX3YO15523 660 aaKnown RBP25.05■■□□□ 1.6
TSEN54-209ENST00000583454 SPINT1O43278 529 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 PYGMP11217 842 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 ABL2P42684 1182 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 SUOXP51687 545 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 BNIP3Q12983 259 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 DNAJC3Q13217 504 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 CCDC157Q569K6 752 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 ALG1LQ6GMV1 187 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 BZW1Q7L1Q6 419 aaKnown RBP25.05■■□□□ 1.6
TSEN54-209ENST00000583454 TTC7BQ86TV6 843 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 PRPF39Q86UA1 669 aaKnown RBP25.05■■□□□ 1.6
TSEN54-209ENST00000583454 UBL4BQ8N7F7 174 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 ECHDC3Q96DC8 303 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 NT5MQ9NPB1 228 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 RBM22Q9NW64 420 aaKnown RBP eCLIP25.05■■□□□ 1.6
TSEN54-209ENST00000583454 DMTF1Q9Y222 760 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 PPP2R2CQ9Y2T4 447 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 RAXQ9Y2V3 346 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 PCDHGA1Q9Y5H4 931 aa25.05■■□□□ 1.6
TSEN54-209ENST00000583454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 TTC24A2A3L6 582 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 TRAFD1O14545 582 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 PPP1R12AO14974 1030 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 RNGTTO60942 597 aaKnown RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 ITGAVP06756 1048 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 PECAM1P16284 738 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 SERPINA4P29622 427 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 NUDT1P36639 197 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 ACADVLP49748 655 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 IFI35P80217 286 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 BCL2L1Q07817 233 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 BRAT1Q6PJG6 821 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 C19orf48Q6RUI8 117 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 IQCHQ86VS3 1027 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 HORMAD1Q86X24 394 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 EID2Q8N6I1 236 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 SPOCK2Q92563 424 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 CNDP2Q96KP4 475 aaKnown RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 IL12RB2Q99665 862 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 HERPUD2Q9BSE4 406 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 HEMGNQ9BXL5 484 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 OSBPL8Q9BZF1 889 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 NOD2Q9HC29 1040 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 LZTFL1Q9NQ48 299 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 PACSIN2Q9UNF0 486 aaPredicted RBP25.04■■□□□ 1.6
TSEN54-209ENST00000583454 CA5BQ9Y2D0 317 aa25.04■■□□□ 1.6
TSEN54-209ENST00000583454 A0A1W2PQU0 124 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 TSPAN6O43657 245 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 ARRB1P49407 418 aaPredicted RBP25.03■■□□□ 1.6
TSEN54-209ENST00000583454 CLDN6P56747 220 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 MAXP61244 160 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 TMEM259Q4ZIN3 620 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 SLC45A4Q5BKX6 768 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 TMEM145Q8NBT3 493 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 P3H4Q92791 437 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 FEM1CQ96JP0 617 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 POLR1EQ9GZS1 481 aaKnown RBP25.03■■□□□ 1.6
TSEN54-209ENST00000583454 KCNF1Q9H3M0 494 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 SCUBE2Q9NQ36 999 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 ZFR2Q9UPR6 939 aaKnown RBP25.03■■□□□ 1.6
TSEN54-209ENST00000583454 ATP8A1Q9Y2Q0 1164 aa25.03■■□□□ 1.6
TSEN54-209ENST00000583454 KCNK1O00180 336 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 HTRA2O43464 458 aaPredicted RBP25.02■■□□□ 1.6
TSEN54-209ENST00000583454 PCDH8O95206 1070 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 LDOC1O95751 146 aaPredicted RBP25.02■■□□□ 1.6
TSEN54-209ENST00000583454 JCHAINP01591 159 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 CES1P23141 567 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 CETN2P41208 172 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 CYP4F3Q08477 520 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 AP1B1Q10567 949 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 PRKD1Q15139 912 aaPredicted RBP25.02■■□□□ 1.6
TSEN54-209ENST00000583454 UGP2Q16851 508 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 ZNF284Q2VY69 593 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 ZSCAN30Q86W11 494 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 ZSWIM9Q86XI8 627 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 OXR1Q8N573 874 aa25.02■■□□□ 1.6
TSEN54-209ENST00000583454 APOC4-APOC2K7ER74 178 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 SOCS5O75159 536 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 APOC2P02655 101 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 RPS21P63220 83 aaKnown RBP25.01■■□□□ 1.59
TSEN54-209ENST00000583454 OVGP1Q12889 678 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 SETMARQ53H47 684 aaPredicted RBP25.01■■□□□ 1.59
TSEN54-209ENST00000583454 KIAA1161Q6NSJ0 714 aa25.01■■□□□ 1.59
TSEN54-209ENST00000583454 AADACL2Q6P093 401 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms