RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 PIM3Q86V86 326 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 NLRP14Q86W24 1093 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 ATCAYQ86WG3 371 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 ZSWIM9Q86XI8 627 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 CREBRFQ8IUR6 639 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 PPM1KQ8N3J5 372 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 MLKLQ8NB16 471 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 FAM46DQ8NEK8 389 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 ZNF397Q8NF99 534 aaPredicted RBP11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 OR2AP1Q8NGE2 309 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 APOBEC4Q8WW27 367 aaKnown RBP11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 RTP4Q96DX8 246 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 TCTN2Q96GX1 697 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 NT5C1BQ96P26 610 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 LGR4Q9BXB1 951 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 DKK3Q9UBP4 350 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 DOLKQ9UPQ8 538 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 MAP4K5Q9Y4K4 846 aa11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.61
SUPT4H1-203ENST00000579289 ITPR3Q14573 2671 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 TSPAN11A1L157 253 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 B4E171 279 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 PPM1DO15297 605 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 P4HA2O15460 535 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 CAPN5O15484 640 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 DAB1O75553 588 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 SORBS2O94875 1100 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 DLGAP3O95886 979 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 ERBB2P04626 1255 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 OR1E1P30953 314 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 TRIM23P36406 574 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 TSPAN7P41732 249 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 DNA2P51530 1060 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 GNA12Q03113 381 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 MTA1Q13330 715 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 TRA2AQ13595 282 aaKnown RBP eCLIP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 LRRC14Q15048 493 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 DPCR1Q3MIW9 517 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 RAB6CQ53S08 254 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 EFHC1Q5JVL4 640 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 ATXN7L2Q5T6C5 722 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 NKAIN2Q5VXU1 208 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 ANKS6Q68DC2 871 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 NETO2Q8NC67 525 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 PATE1Q8WXA2 126 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 WDR92Q96MX6 357 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 WRAP53Q9BUR4 548 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 MAGEB5Q9BZ81 275 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 RAB6CQ9H0N0 254 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 ATP13A1Q9HD20 1204 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 KLQ9UEF7 1012 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 MFHAS1Q9Y4C4 1052 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 TMEM184BQ9Y519 407 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 MRPS18BQ9Y676 258 aaKnown RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 ESPL1Q14674 2120 aa11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 RP1L1Q8IWN7 2480 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-203ENST00000579289 INSIG1O15503 277 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 POP4O95707 220 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 TNFP01375 233 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 MPSTP25325 297 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 KIAA1024LP59773 190 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 BRMS1LQ5PSV4 323 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 GDPD4Q6W3E5 623 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 ARHGAP22Q7Z5H3 698 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 TTC7BQ86TV6 843 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 NAGSQ8N159 534 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 OR4D9Q8NGE8 314 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 STARD8Q92502 1023 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 OSBPL1AQ9BXW6 950 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 INTS2Q9H0H0 1204 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 NOL6Q9H6R4 1146 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 WDCPQ9H6R7 721 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 TNRC6AQ8NDV7 1962 aaKnown RBP11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 F8P00451 2351 aa11.23□□□□□ -0.61
SUPT4H1-203ENST00000579289 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 B4DGG1 531 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 KRIT1O00522 736 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 NEMP1O14524 444 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 TNFRSF10CO14798 259 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 LDLRP01130 860 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 PRF1P14222 555 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 ELAVL4P26378 380 aaKnown RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 MAP4P27816 1152 aaKnown RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 MC2RQ01718 297 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 ABHD18Q0P651 414 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 RALGDSQ12967 914 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 MTM1Q13496 603 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 ARHGEF7Q14155 803 aa11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 TPD52L1Q16890 204 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-203ENST00000579289 AMZ1Q400G9 498 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms