RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 A6NNZ2 444 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 F5H5T6 163 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 AGPSO00116 658 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 AP3B1O00203 1094 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 PLK4O00444 970 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 RASGRF2O14827 1237 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 ALOX15BO15296 676 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 RGS16O15492 202 aaPredicted RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 PSMD3O43242 534 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 SPAG6O75602 509 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 EPHX1P07099 455 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 ABHD2P08910 425 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TSHRP16473 764 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TPSB2P20231 275 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 CCNCP24863 283 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 GARSP41250 739 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 ABCG1P45844 678 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 NDST2P52849 883 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 GALNT2Q10471 571 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 AUHQ13825 339 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 ZNF234Q14588 700 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 KCNJ11Q14654 390 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TEAD4Q15561 434 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TPSAB1Q15661 275 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 KIF19Q2TAC6 998 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 BBS9Q3SYG4 887 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TUBB8Q3ZCM7 444 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 CCDC38Q502W7 563 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 MS4A13Q5J8X5 152 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 AGBL2Q5U5Z8 902 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 MANEALQ5VSG8 457 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 LAYNQ6UX15 382 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 PID1Q7Z2X4 250 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 PDCD7Q8N8D1 485 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 RTL3Q8N8U3 475 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 OR2W6PQ8NHA6 318 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 ZBTB9Q96C00 473 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 HDAC11Q96DB2 347 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 LRRC39Q96DD0 335 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 RPRD1AQ96P16 312 aaPredicted RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 TMEM109Q9BVC6 243 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 C6orf106Q9H6K1 298 aaPredicted RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 EIF2B3Q9NR50 452 aaKnown RBP10.29□□□□□ -0.76
SS18-210ENST00000578700 NINJ2Q9NZG7 142 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 VANGL2Q9ULK5 521 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 MFHAS1Q9Y4C4 1052 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 SNX10Q9Y5X0 201 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 SLCO1B1Q9Y6L6 691 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 CKAP5Q14008 2032 aa10.29□□□□□ -0.76
SS18-210ENST00000578700 TYW5A2RUC4 315 aaKnown RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 ARHGAP42A6NI28 874 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ERI2A8K979 691 aaKnown RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 WASH4PA8MWX3 477 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 I6L893 689 aaPredicted RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 TP73O15350 636 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 TNFSF14O43557 240 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 STC2O76061 302 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 FSBPO95073 299 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 HLA-EP13747 358 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 JUPP14923 745 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 PRKCHP24723 683 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ITPKBP27987 946 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 MAGEA6P43360 314 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 AFF3P51826 1226 aaKnown RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 CLDN6P56747 220 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 SEMA5AQ13591 1074 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 PRAMEF14Q5SWL7 426 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 RAP1GAP2Q684P5 730 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 TAOK1Q7L7X3 1001 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ZNF354CQ86Y25 554 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 MCUQ8NE86 351 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 UHMK1Q8TAS1 419 aaKnown RBP10.28□□□□□ -0.76
SS18-210ENST00000578700 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 AZIN2Q96A70 460 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 PGM2Q96G03 612 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 C9orf72Q96LT7 481 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 TSGA13Q96PP4 275 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 TMBIM4Q9HC24 238 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 TMEM248Q9NWD8 314 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ELOVL2Q9NXB9 296 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 DKK4Q9UBT3 224 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 RSPH14Q9UHP6 348 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 FBXO10Q9UK96 956 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 CLEC4EQ9ULY5 219 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 ANKRD6Q9Y2G4 727 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 PCDHGB2Q9Y5G2 931 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 NFS1Q9Y697 457 aa10.28□□□□□ -0.76
SS18-210ENST00000578700 NUMA1Q14980 2115 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 A0A087WV48 116 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 EXOC1LA0A1B0GW35 172 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 FAM47DPA6NHR8 397 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 SMIM23A6NLE4 172 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 E7ESA3 106 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 H0Y8X5 98 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 KCNK1O00180 336 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms