RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SSUH2Q9Y2M2 353 aa16.17■□□□□ 0.18
VAPA-204ENST00000577901 ERVH48-1M5A8F1 160 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 AP1G1O43747 822 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 CD48P09326 243 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 NME1P15531 152 aaKnown RBP16.16■□□□□ 0.18
VAPA-204ENST00000577901 HADHBP55084 474 aaKnown RBP16.16■□□□□ 0.18
VAPA-204ENST00000577901 UCNP55089 124 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 CFHR1Q03591 330 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 MMRN1Q13201 1228 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 DPYSL3Q14195 570 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 ATXN7L2Q5T6C5 722 aaPredicted RBP16.16■□□□□ 0.18
VAPA-204ENST00000577901 PARS2Q7L3T8 475 aaKnown RBP16.16■□□□□ 0.18
VAPA-204ENST00000577901 PARGQ86W56 976 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 OR6K2Q8NGY2 324 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 ZNF670Q9BS34 389 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 CPNE5Q9HCH3 593 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 NCKIPSDQ9NZQ3 722 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 MFHAS1Q9Y4C4 1052 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 CSNK1G3Q9Y6M4 447 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 PTPRQQ9UMZ3 2332 aa16.16■□□□□ 0.18
VAPA-204ENST00000577901 ASH1LQ9NR48 2969 aaKnown RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 A0A0A6YYK5 440 aaPredicted RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 FPGTO14772 594 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 SGCGQ13326 291 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 PDE1CQ14123 709 aaPredicted RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 GRM3Q14832 879 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 CDKN3Q16667 212 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 ISXQ2M1V0 245 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 TAF1BQ53T94 588 aaPredicted RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 ANKRD20A8PQ5CZ79 823 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 ZNF805Q5CZA5 627 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 TMCO4Q5TGY1 634 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 LRRC38Q5VT99 294 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 GDPD4Q6W3E5 623 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 ZSCAN30Q86W11 494 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 LRRC49Q8IUZ0 686 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 RHOT1Q8IXI2 618 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 NETO2Q8NC67 525 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 NSMCE1Q8WV22 266 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 KCNE4Q8WWG9 221 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 CALR3Q96L12 384 aaKnown RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 ZNF599Q96NL3 588 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 LENG8Q96PV6 779 aaPredicted RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
VAPA-204ENST00000577901 ASCL3Q9NQ33 180 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 THSD1Q9NS62 852 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 ETNK2Q9NVF9 386 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 KLF15Q9UIH9 416 aa16.15■□□□□ 0.18
VAPA-204ENST00000577901 CPED1A4D0V7 1026 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 IGLON5A6NGN9 336 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 CAPN8A6NHC0 703 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 KLK10O43240 276 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 AQP9O43315 295 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 TSPAN6O43657 245 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 SPOPO43791 374 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 LZTS3O60299 673 aaPredicted RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 UGT2B4P06133 528 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 JUNDP17535 347 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 COMTP21964 271 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 TGM2P21980 687 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 KDELR1P24390 212 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 GKP32189 559 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 RENBPP51606 427 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 RHDQ02161 417 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 ARHGAP40Q5TG30 622 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 GUSBP11Q6P575 273 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 ARHGAP36Q6ZRI8 547 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 EFL1Q7Z2Z2 1120 aaKnown RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 BBS5Q8N3I7 341 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 PCDH19Q8TAB3 1148 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 LMX1AQ8TE12 382 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 RAB7BQ96AH8 199 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 CINPQ9BW66 212 aaPredicted RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 CPEB1Q9BZB8 566 aaKnown RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 DPH1Q9BZG8 443 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 DDX56Q9NY93 547 aaKnown RBP16.14■□□□□ 0.17
VAPA-204ENST00000577901 LHX3Q9UBR4 397 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 SATB2Q9UPW6 733 aa16.14■□□□□ 0.17
VAPA-204ENST00000577901 TENM4Q6N022 2769 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 C16orf96A6NNT2 1141 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 NEMP1O14524 444 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
VAPA-204ENST00000577901 SPINT1O43278 529 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 ABL2P42684 1182 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 CSNK1DP48730 415 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 PFN3P60673 137 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 NSUN2Q08J23 767 aaKnown RBP eCLIP16.13■□□□□ 0.17
VAPA-204ENST00000577901 LBRQ14739 615 aaKnown RBP16.13■□□□□ 0.17
VAPA-204ENST00000577901 PAFAH1B3Q15102 231 aaKnown RBP16.13■□□□□ 0.17
VAPA-204ENST00000577901 NR0B2Q15466 257 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 DEFB133Q30KQ1 61 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 C3orf38Q5JPI3 329 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 TPRG1LQ5T0D9 272 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 IGF2-ASQ6U949 168 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 RAD9BQ6WBX8 426 aa16.13■□□□□ 0.17
VAPA-204ENST00000577901 VSIG1Q86XK7 387 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms