RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
PRPF8-215ENST00000576958 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
PRPF8-215ENST00000576958 GFM1Q96RP9 751 aaKnown RBP12.1□□□□□ -0.47
PRPF8-215ENST00000576958 SYT11Q9BT88 431 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 SNRNP25Q9BV90 132 aaKnown RBP12.1□□□□□ -0.47
PRPF8-215ENST00000576958 DPH1Q9BZG8 443 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 LRRN3Q9H3W5 708 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 AP4E1Q9UPM8 1137 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 DOLKQ9UPQ8 538 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 ATP8A1Q9Y2Q0 1164 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
PRPF8-215ENST00000576958 ARHGEF17Q96PE2 2063 aaPredicted RBP12.1□□□□□ -0.47
PRPF8-215ENST00000576958 PRAMEF33A0A0G2JMD5 474 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 LGALS16A8MUM7 142 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 J3QKU1 62 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 DFFAO00273 331 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 PRAMEF10O60809 474 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 TCEA3O75764 348 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 CALB1P05937 261 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 NCAPHQ15003 741 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 PARP15Q460N3 678 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 AFMIDQ63HM1 303 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 ESRP1Q6NXG1 681 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 LIPIQ6XZB0 460 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 TRIM72Q6ZMU5 477 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 CCDC81Q6ZN84 652 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 RAB11FIP2Q7L804 512 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 FBXO39Q8N4B4 442 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 GPR156Q8NFN8 814 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 FNIP1Q8TF40 1166 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 SNRNP27Q8WVK2 155 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 EXTL1Q92935 676 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 NAT6Q93015 286 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 ARHGEF26Q96DR7 871 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 RNF31Q96EP0 1072 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 WDR92Q96MX6 357 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 RBM15Q96T37 977 aaKnown RBP eCLIP12.09□□□□□ -0.474e-6■■■□□ 15.7
PRPF8-215ENST00000576958 CNPY3Q9BT09 278 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 SPATS2LQ9NUQ6 558 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
PRPF8-215ENST00000576958 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 MOSPD1Q9UJG1 213 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 LOXL2Q9Y4K0 774 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
PRPF8-215ENST00000576958 CXorf51AA0A1B0GTR3 108 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ZSCAN5CA6NGD5 496 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 C9orf172C9J069 976 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 EEF2KO00418 725 aaKnown RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 TRAFD1O14545 582 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ITGA2BP08514 1039 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ERCC2P18074 760 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 MPSTP25325 297 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 AK4P27144 223 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 POLD2P49005 469 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 RPIAP49247 311 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ARSDP51689 593 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 UCNP55089 124 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 INHBCP55103 352 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 OR1D5P58170 312 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 YBEYP58557 167 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 UBXN1Q04323 297 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 RAD51Q06609 339 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 SLC10A7Q0GE19 358 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ELOCQ15369 112 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 FKBP15Q5T1M5 1219 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 DENND2CQ68D51 928 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 SMYD5Q6GMV2 418 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ACAD10Q6JQN1 1059 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 RFX8Q6ZV50 586 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 IRF2BP2Q7Z5L9 587 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 SPRED1Q7Z699 444 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 TAF8Q7Z7C8 310 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 CPNE8Q86YQ8 564 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 FSTL5Q8N475 847 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 ARL14Q8N4G2 192 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 FAM46DQ8NEK8 389 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 LRRN4Q8WUT4 740 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 LIN37Q96GY3 246 aaPredicted RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 TBATAQ96M53 351 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 EVA1BQ9NVM1 165 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 B4GALT6Q9UBX8 382 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 PCDHGC4Q9Y5F7 938 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 SPENQ96T58 3664 aaKnown RBP12.08□□□□□ -0.48
PRPF8-215ENST00000576958 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
PRPF8-215ENST00000576958 B4GAT1O43505 415 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms