RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ZNF140P52738 457 aaPredicted RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 POU4F1Q01851 419 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 TRAF2Q12933 501 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 USP4Q13107 963 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 ZNF77Q15935 545 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 CCDC121Q6ZUS5 278 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 MFSD6LQ8IWD5 586 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 RMDN1Q96DB5 314 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 C7orf26Q96N11 449 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 C1QTNF1Q9BXJ1 281 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 NLE1Q9NVX2 485 aaPredicted RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 PLK2Q9NYY3 685 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 TBC1D14Q9P2M4 693 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 INTS6Q9UL03 887 aaKnown RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 FCF1Q9Y324 198 aaKnown RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 PCDHGC4Q9Y5F7 938 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 SPO11Q9Y5K1 396 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 ANKRD66B4E2M5 251 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 HAUS5O94927 633 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 PDHA1P08559 390 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 CRABP2P29373 138 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 CD70P32970 193 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 CLCN5P51795 746 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 LACTB2Q53H82 288 aaPredicted RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 TRPM8Q7Z2W7 1104 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 RNF135Q8IUD6 432 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 PLD6Q8N2A8 252 aaKnown RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 ZNF557Q8N988 423 aaPredicted RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 SCG3Q8WXD2 468 aaKnown RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 DNAJC1Q96KC8 554 aaKnown RBP28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 TBATAQ96M53 351 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 TLK1Q9UKI8 766 aa28.55■■■□□ 2.16
CTDNEP1-210ENST00000574322 ATG2AQ2TAZ0 1938 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 SLC35E2BP0CK96 405 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 MAPK8P45983 427 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 RAB10P61026 200 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 HYAL1Q12794 435 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 OTUD6BQ8N6M0 293 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 KIAA1958Q8N8K9 716 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 OR6P1Q8NGX9 317 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 OTUB2Q96DC9 234 aa28.54■■■□□ 2.16
CTDNEP1-210ENST00000574322 CCDC195A0A1B0GUA6 201 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 SNNO75324 88 aaPredicted RBP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 S1PR4O95977 384 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 TROVE2P10155 538 aaKnown RBP eCLIP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 FOSL2P15408 326 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 CORO7P57737 925 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 BST1Q10588 318 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 PCLAFQ15004 111 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 CHI3L2Q15782 390 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 FASTKD1Q53R41 847 aaKnown RBP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 TAF1BQ53T94 588 aaPredicted RBP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 GRASPQ7Z6J2 395 aaPredicted RBP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 COPG2Q9UBF2 871 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 PRDM4Q9UKN5 801 aa28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 PRRC2BQ5JSZ5 2229 aaKnown RBP28.53■■■□□ 2.16
CTDNEP1-210ENST00000574322 PRAMEF12O95522 483 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 APOA4P06727 396 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 STMN1P16949 149 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 WEE1P30291 646 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 ALDH3A1P30838 453 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 NTHL1P78549 312 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 TMPRSS15P98073 1019 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 OCRLQ01968 901 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 SF3A3Q12874 501 aaKnown RBP eCLIP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 MBLAC2Q68D91 279 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 CNSTQ6PJW8 725 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 PTAR1Q7Z6K3 402 aaPredicted RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 SLC41A1Q8IVJ1 513 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 LPCAT1Q8NF37 534 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 MDGA1Q8NFP4 955 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 C10orf82Q8WW14 230 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 CDKN2AIPNLQ96HQ2 116 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 HACD3Q9P035 362 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 USH1CQ9Y6N9 552 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 K7ERQ8 282 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 PIRTP0C851 137 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 OGNP20774 298 aaKnown RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 RPL26P61254 145 aaKnown RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 IRF9Q00978 393 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 TMEM25Q86YD3 366 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 IRF7Q92985 503 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 OMDQ99983 421 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 FBXO6Q9NRD1 293 aaPredicted RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 ZNF358Q9NW07 568 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 RPL26L1Q9UNX3 145 aaKnown RBP28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 ACOT9Q9Y305 439 aa28.52■■■□□ 2.16
CTDNEP1-210ENST00000574322 CCDC162PA2VCL2 907 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 C2orf81A6NN90 581 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 AURKAO14965 403 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 SMAD6O43541 496 aaKnown RBP28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 GLP2RO95838 553 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 GOT2P00505 430 aaKnown RBP28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 PITRM1Q5JRX3 1037 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 CES4AQ5XG92 561 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 MRNIPQ6NTE8 343 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 OR13C4Q8NGS5 318 aa28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 ISG20Q96AZ6 181 aaKnown RBP28.51■■■□□ 2.15
CTDNEP1-210ENST00000574322 TRIM55Q9BYV6 548 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms