RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 IGF2-ASQ6U949 168 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCDC81Q6ZN84 652 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 RAB11FIP2Q7L804 512 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TAF8Q7Z7C8 310 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 SRLQ86TD4 932 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 GKN2Q86XP6 184 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PELI3Q8N2H9 469 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 FSTL5Q8N475 847 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARFGAP1Q8N6T3 406 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 NPWQ8N729 165 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 FAM46DQ8NEK8 389 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 ANKRD20A12PQ8NF67 263 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCL4L1Q8NHW4 92 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TTC9Q92623 222 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 GRAMD1AQ96CP6 724 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TBATAQ96M53 351 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 NSMCE3Q96MG7 304 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 WDR92Q96MX6 357 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PEBP4Q96S96 227 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 KCTD15Q96SI1 283 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 LGR4Q9BXB1 951 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMEM168Q9H0V1 697 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 LRRN3Q9H3W5 708 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 SP110Q9HB58 689 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 FGF22Q9HCT0 170 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 PISDQ9UG56 409 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 LIMA1Q9UHB6 759 aaKnown RBP8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 AP4E1Q9UPM8 1137 aa8.66□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARHGAP42A6NI28 874 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMEM110-MUSTN1A8MSY1 372 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 B4DGG1 531 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 D6RAR5 112 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 J3QKU1 62 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 K7ENP7 123 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CACNB4O00305 520 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 TOR1BO14657 336 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 EFSO43281 561 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ITGA2BP08514 1039 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ATP1A3P13637 1013 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ERCC2P18074 760 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ITIH1P19827 911 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 TNFAIP3P21580 790 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 SERPINA4P29622 427 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 MMP12P39900 470 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 SCNN1BP51168 640 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 NDST2P52849 883 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 INHBCP55103 352 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 MYL5Q02045 173 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 BCL2L1Q07817 233 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 MAMLD1Q13495 774 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 MTM1Q13496 603 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ACOX1Q15067 660 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 PTPRRQ15256 657 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 INO80CQ6PI98 192 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 BRAT1Q6PJG6 821 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 LVRNQ6Q4G3 990 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 LIPIQ6XZB0 460 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 RFX8Q6ZV50 586 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CLEC14AQ86T13 490 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCNJLQ8IV13 435 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARHGAP12Q8IWW6 846 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 WDR48Q8TAF3 677 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCDC97Q96F63 343 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZNF641Q96N77 438 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 SNRNP25Q9BV90 132 aaKnown RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CINPQ9BW66 212 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 STRADBQ9C0K7 418 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 DPEP2Q9H4A9 486 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 ATP13A3Q9H7F0 1226 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 CYP4F12Q9HCS2 524 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 RNF215Q9Y6U7 377 aa8.65□□□□□ -1.02
CTDNEP1-203ENST00000570385 LRP4O75096 1905 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ATMQ13315 3056 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 A0A0U1RQS6 177 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GOLGA6CA6NDK9 693 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GOLGA6BA6NDN3 693 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 NOBOXO60393 691 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ELFN1P0C7U0 828 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 JMJD7P0C870 316 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GOLGA6DP0CG33 693 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 FERP16591 822 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 DESP17661 470 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GM2AP17900 193 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 MIPP30301 263 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ETV5P41161 510 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 SUOXP51687 545 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAPK10P53779 464 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 AIF1P55008 147 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAZP56270 477 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 SLC10A7Q0GE19 358 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 GRM3Q14832 879 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 NCAPHQ15003 741 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 AMZ1Q400G9 498 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 ERMARDQ5T6L9 678 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 PHF19Q5T6S3 580 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 USP53Q70EK8 1073 aa8.64□□□□□ -1.03
CTDNEP1-203ENST00000570385 APTXQ7Z2E3 356 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms