RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 GPD1P21695 349 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 SERPINA4P29622 427 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 STAT1P42224 750 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 NSFP46459 744 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 UBE2HP62256 183 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 POLR2LP62875 67 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 PEX6Q13608 980 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 CAMK4Q16566 473 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 RAB6CQ53S08 254 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 ZNF574Q6ZN55 896 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 PIM3Q86V86 326 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 Q8N9G6 341 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 C3orf20Q8ND61 904 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 JOSD2Q8TAC2 188 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 USP7Q93009 1102 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 C11orf70Q9BRQ4 267 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 RAB6CQ9H0N0 254 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 ATP13A3Q9H7F0 1226 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 GEMIN8Q9NWZ8 242 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 RNF215Q9Y6U7 377 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 LRP4O75096 1905 aa15.84■□□□□ 0.13
HERPUD1-215ENST00000568676 ANKRD62A6NC57 917 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 STMND1H3BQB6 276 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 HGSO14964 777 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 INSIG1O15503 277 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 CALB1P05937 261 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 ITIH1P19827 911 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 EEF1GP26641 437 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 RFC1P35251 1148 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 TRIM23P36406 574 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 NDST2P52849 883 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 FMO1Q01740 532 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 CYTH1Q15438 398 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 TBR1Q16650 682 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 MAP9Q49MG5 647 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 OR1E3Q8WZA6 343 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 SLC25A18Q9H1K4 315 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 DPEP2Q9H4A9 486 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 SCN8AQ9UQD0 1980 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 AHCTF1Q8WYP5 2266 aa15.83■□□□□ 0.12
HERPUD1-215ENST00000568676 TMEM202A6NGA9 273 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 SIGLEC16A6NMB1 481 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 EIF3CLB5ME19 914 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 C9orf172C9J069 976 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 CREB3O43889 395 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 RECQL5O94762 991 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 ELFN1P0C7U0 828 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 FAM87AP0C7U9 286 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 UNGP13051 313 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 ATP1A2P50993 1020 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 MAPK10P53779 464 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 NR1D2Q14995 579 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 TCEA2Q15560 299 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 PHF19Q5T6S3 580 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 SPECC1LQ69YQ0 1117 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 WDR59Q6PJI9 974 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 PHF13Q86YI8 300 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 SLC30A5Q8TAD4 765 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 GPBAR1Q8TDU6 330 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 SLC20A1Q8WUM9 679 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 FUBP1Q96AE4 644 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 EXOC2Q96KP1 924 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 EIF3CQ99613 913 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 MAGEB5Q9BZ81 275 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 KLC2Q9H0B6 622 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 WDR26Q9H7D7 661 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 PDFQ9HBH1 243 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 FGF22Q9HCT0 170 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 ADAM22Q9P0K1 906 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 FOXJ2Q9P0K8 574 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 SEPT3Q9UH03 358 aa15.82■□□□□ 0.12
HERPUD1-215ENST00000568676 A0A1W2PQ67 120 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 FAM170AA1A519 330 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 CYSRT1A8MQ03 144 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 B4DGG1 531 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 PRAMEF11O60813 436 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 GFPT2O94808 682 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 KRT10P13645 584 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 SOX5P35711 763 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 ETV5P41161 510 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 ZNF143P52747 638 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 B4GALNT1Q00973 533 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 NSUN2Q08J23 767 aaKnown RBP eCLIP15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 TRA2AQ13595 282 aaKnown RBP eCLIP15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 AFMIDQ63HM1 303 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 SCYL2Q6P3W7 929 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 ZNF438Q7Z4V0 828 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 C17orf82Q86X59 251 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 ZFAND4Q86XD8 727 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 PYROXD2Q8N2H3 581 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 CCDC112Q8NEF3 446 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 SPOCK2Q92563 424 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 ECHDC3Q96DC8 303 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 DPYSL5Q9BPU6 564 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 GSDMCQ9BYG8 508 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 TRIM4Q9C037 500 aa15.81■□□□□ 0.12
HERPUD1-215ENST00000568676 TMEM168Q9H0V1 697 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms