RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 XPAP23025 273 aaPredicted RBP9.85□□□□□ -0.83
CLK3-220ENST00000567992 CES1P23141 567 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 AKT2P31751 481 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 IGFALSP35858 605 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CD86P42081 329 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 ID4P47928 161 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 ITKQ08881 620 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 XRCC4Q13426 336 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 PUM1Q14671 1186 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLK3-220ENST00000567992 AGERQ15109 404 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CNGA3Q16281 694 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 TEX44Q53QW1 395 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 SLC45A4Q5BKX6 768 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CFAP58Q5T655 872 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 ARMC12Q5T9G4 340 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 ERAP2Q6P179 960 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 IL27RAQ6UWB1 636 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 KYAT3Q6YP21 454 aaKnown RBP9.85□□□□□ -0.83
CLK3-220ENST00000567992 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLK3-220ENST00000567992 OR13H1Q8NG92 308 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CXorf40AQ8TE69 158 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 PDCD6IPQ8WUM4 868 aaKnown RBP9.85□□□□□ -0.83
CLK3-220ENST00000567992 TEKT5Q96M29 485 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 AGAP3Q96P47 875 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 TRIB3Q96RU7 358 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 FAM118BQ9BPY3 351 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 SLC25A51Q9H1U9 297 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 GAREM1Q9H706 876 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CAAP1Q9H8G2 361 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 C10orf88Q9H8K7 445 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 MBNL1Q9NR56 388 aaKnown RBP9.85□□□□□ -0.83
CLK3-220ENST00000567992 SEPT10Q9P0V9 454 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 PHTF1Q9UMS5 762 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 R3HDM2Q9Y2K5 976 aaKnown RBP9.85□□□□□ -0.83
CLK3-220ENST00000567992 PPIL1Q9Y3C6 166 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 HS3ST3A1Q9Y663 406 aa9.85□□□□□ -0.83
CLK3-220ENST00000567992 CABIN1Q9Y6J0 2220 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 NCOR2Q9Y618 2525 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 SPTBN2O15020 2390 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 A0A0J9YYE9 177 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 A0A1B0GTQ1 180 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 CFAP69A5D8W1 941 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 HACD1B0YJ81 288 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 OPHN1O60890 802 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 TM7SF2O76062 418 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 HEXIM1O94992 359 aaKnown RBP9.84□□□□□ -0.83
CLK3-220ENST00000567992 TJP3O95049 919 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 TRBC1P01850 177 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 ALPIP09923 528 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 THEGLP0DJG4 465 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 CTPS1P17812 591 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 SDHBP21912 280 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 RBL1P28749 1068 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 VIPR1P32241 457 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 ATXN3P54252 364 aaPredicted RBP9.84□□□□□ -0.83
CLK3-220ENST00000567992 C21orf59P57076 290 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 PFN3P60673 137 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 POLR2LP62875 67 aaKnown RBP9.84□□□□□ -0.83
CLK3-220ENST00000567992 FAM193AP78312 1265 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 OVGP1Q12889 678 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 STAT4Q14765 748 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 IRF4Q15306 451 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 SLC14A2Q15849 920 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 WSCD2Q2TBF2 565 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 UAP1L1Q3KQV9 507 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 PRAMEF14Q5SWL7 426 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 LIPIQ6XZB0 460 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 DBX2Q6ZNG2 339 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 ADAT2Q7Z6V5 191 aaKnown RBP9.84□□□□□ -0.83
CLK3-220ENST00000567992 PIP4P1Q86T03 277 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 TSPAN33Q86UF1 283 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 REXO1L1PQ8IX06 675 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 ZNF567Q8N184 647 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 CBARPQ8N350 705 aaPredicted RBP9.84□□□□□ -0.83
CLK3-220ENST00000567992 HTR3CQ8WXA8 447 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 SCRN2Q96FV2 425 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 COQ10AQ96MF6 247 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 RBM15Q96T37 977 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLK3-220ENST00000567992 GORASP1Q9BQQ3 440 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 TLR10Q9BXR5 811 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 ERVMER34-1Q9H9K5 563 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 GLOD4Q9HC38 313 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 CHKBQ9Y259 395 aa9.84□□□□□ -0.83
CLK3-220ENST00000567992 A0A0U1RQS6 177 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 CAPN8A6NHC0 703 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 A6NNZ2 444 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 A8MX80 341 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 MTSS1O43312 755 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 NRDCO43847 1150 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 MT-CYBP00156 380 aaPredicted RBP9.83□□□□□ -0.84
CLK3-220ENST00000567992 ELFN1P0C7U0 828 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 RBP3P10745 1247 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 NFKB1P19838 968 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 EPHA8P29322 1005 aaPredicted RBP9.83□□□□□ -0.84
CLK3-220ENST00000567992 HNF1BP35680 557 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 CCT8P50990 548 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 EIF3EP60228 445 aaKnown RBP9.83□□□□□ -0.84
CLK3-220ENST00000567992 IL9RQ01113 521 aa9.83□□□□□ -0.84
CLK3-220ENST00000567992 SGCGQ13326 291 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms