RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PELI3Q8N2H9 469 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PGBD5Q8N414 524 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 HCAR2Q8TDS4 363 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 LRRN4Q8WUT4 740 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 FUBP1Q96AE4 644 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PSKH2Q96QS6 385 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 KLQ9UEF7 1012 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 SALL4Q9UJQ4 1053 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 RP1P56715 2156 aa12.29□□□□□ -0.44
GTF3C1-208ENST00000567843 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 A0A087WV48 116 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PMS2P1A4D2B8 440 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 TMEM202A6NGA9 273 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 TMEM110-MUSTN1A8MSY1 372 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 LMO7DNF2Z398 122 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 AGRPO00253 132 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 TRAFD1O14545 582 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 MAFKO60675 156 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PEX11BO96011 259 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 CYP1A2P05177 515 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 ELFN1P0C7U0 828 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 ABCG1P45844 678 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SUOXP51687 545 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 HK3P52790 923 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SRP54P61011 504 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 GABREP78334 506 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SLC25A11Q02978 314 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 RFTN1Q14699 578 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 NFATC4Q14934 902 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 C6orf132Q5T0Z8 1188 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 FAM182AQ5T1J6 154 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SFTPA2Q8IWL1 248 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 LZTR1Q8N653 840 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PCDH19Q8TAB3 1148 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 ECHDC3Q96DC8 303 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PDXPQ96GD0 296 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 DEPDC7Q96QD5 511 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 BOCQ9BWV1 1114 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PACSIN1Q9BY11 444 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 NOD2Q9HC29 1040 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 SCUBE2Q9NQ36 999 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 B4GALT6Q9UBX8 382 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 IP6K2Q9UHH9 426 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 PADI4Q9UM07 663 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 RAI2Q9Y5P3 530 aa12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 BZW2Q9Y6E2 419 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-208ENST00000567843 EME2A4GXA9 379 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 TPP1O14773 563 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 RASGRP1O95267 797 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 GP1BAP07359 652 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 CTPS1P17812 591 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 GM2AP17900 193 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 IL4RP24394 825 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 HTR1BP28222 390 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 RENBPP51606 427 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 AP1S1P61966 158 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 POLR2LP62875 67 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 ITKQ08881 620 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 TRAF2Q12933 501 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 MTM1Q13496 603 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 ACAP1Q15027 740 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 ISXQ2M1V0 245 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 C3orf38Q5JPI3 329 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 DPPA4Q7L190 304 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 KYQ8NBH2 561 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 FGF11Q92914 225 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 ATXN7L3BQ96GX2 97 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 WDR92Q96MX6 357 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 ZNF599Q96NL3 588 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 BBC3Q96PG8 261 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 CCDC3Q9BQI4 270 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 LGR4Q9BXB1 951 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 USP29Q9HBJ7 922 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 FGF22Q9HCT0 170 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 NT5MQ9NPB1 228 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
GTF3C1-208ENST00000567843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 A0A1W2PNU3 283 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 MYO1FO00160 1098 aa12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 CACNB4O00305 520 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 RRP8O43159 456 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 CPP00450 1065 aa12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 TNFP01375 233 aa12.26□□□□□ -0.45
GTF3C1-208ENST00000567843 ACTN2P35609 894 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms