RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 MCEEQ96PE7 176 aa23.06■■□□□ 1.28
CNEP1R1-209ENST00000567712 SLC39A8Q9C0K1 460 aa23.06■■□□□ 1.28
CNEP1R1-209ENST00000567712 PISDQ9UG56 409 aa23.06■■□□□ 1.28
CNEP1R1-209ENST00000567712 ATP8A1Q9Y2Q0 1164 aa23.06■■□□□ 1.28
CNEP1R1-209ENST00000567712 PRAMEF11O60813 436 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 HTR1BP28222 390 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 STAT1P42224 750 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 ZFP36L1Q07352 338 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 CA9Q16790 459 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 OGFOD3Q6PK18 319 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 CCNJLQ8IV13 435 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 TSEN2Q8NCE0 465 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 LGR4Q9BXB1 951 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 TMEM168Q9H0V1 697 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 NUP62CLQ9H1M0 184 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 CATSPERBQ9H7T0 1116 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 ACSL6Q9UKU0 697 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 LOXL2Q9Y4K0 774 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 DGKBQ9Y6T7 804 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 SDK2Q58EX2 2172 aa23.05■■□□□ 1.28
CNEP1R1-209ENST00000567712 SLC28A2O43868 658 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 RECQL5O94762 991 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 TNFP01375 233 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 CALB1P05937 261 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 WT1P19544 449 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 EIF3IQ13347 325 aaKnown RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 MTM1Q13496 603 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 ARHGAP36Q6ZRI8 547 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 ENOX1Q8TC92 643 aaKnown RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 ZNF641Q96N77 438 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 RNF215Q9Y6U7 377 aa23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 TLN1Q9Y490 2541 aaKnown RBP23.04■■□□□ 1.28
CNEP1R1-209ENST00000567712 PAPOLAP51003 745 aaKnown RBP23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 SYCP1Q15431 976 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 CERCAMQ5T4B2 595 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 ERAP2Q6P179 960 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 DNAJC24Q6P3W2 148 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 BRAT1Q6PJG6 821 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 LIPIQ6XZB0 460 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 TAF8Q7Z7C8 310 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 SRLQ86TD4 932 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 ARFGAP1Q8N6T3 406 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 FAM46DQ8NEK8 389 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 EXTL1Q92935 676 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 STRADBQ9C0K7 418 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 SEPT11Q9NVA2 429 aaKnown RBP23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 FOXJ2Q9P0K8 574 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 APPL1Q9UKG1 709 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 HECTD1Q9ULT8 2610 aa23.03■■□□□ 1.28
CNEP1R1-209ENST00000567712 PRAMEF33A0A0G2JMD5 474 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 A8MX80 341 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 PRAMEF10O60809 474 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 KIAA1024LP59773 190 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TPI1P60174 286 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 NFKB2Q00653 900 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 HLTFQ14527 1009 aaKnown RBP eCLIP23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 GRM3Q14832 879 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 SPRED1Q7Z699 444 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 VASH2Q86V25 355 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 ZFAND4Q86XD8 727 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 ARHGAP12Q8IWW6 846 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TP53INP2Q8IXH6 220 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 OR56A4Q8NGH8 313 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 ECHDC3Q96DC8 303 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TMEM74Q96NL1 305 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TUBGCP5Q96RT8 1024 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 CNPY3Q9BT09 278 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 FANCLQ9NW38 375 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TAS2R14Q9NYV8 317 aa23.02■■□□□ 1.28
CNEP1R1-209ENST00000567712 TTC24A2A3L6 582 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 B4DGG1 531 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 TMX2-CTNND1H3BSU7 103 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 NVLO15381 856 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 FGF10O15520 208 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 JMJD7P0C870 316 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 GLB1P16278 677 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 NDST2P52849 883 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 NFATC3Q12968 1075 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 CT47A1Q5JQC4 288 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 SLITRK4Q8IW52 837 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 PEBP4Q96S96 227 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 AGPAT1Q99943 283 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 SEMA6CQ9H3T2 930 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 CLMPQ9H6B4 373 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 LRIT1Q9P2V4 623 aa23.01■■□□□ 1.27
CNEP1R1-209ENST00000567712 MAST4O15021 2626 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 TRAFD1O14545 582 aaPredicted RBP23■■□□□ 1.27
CNEP1R1-209ENST00000567712 B4GAT1O43505 415 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 FUCA1P04066 466 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 ITGB6P18564 788 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 TRIM23P36406 574 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 CSNK1DP48730 415 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 COPB1P53618 953 aaKnown RBP23■■□□□ 1.27
CNEP1R1-209ENST00000567712 B4GALNT1Q00973 533 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 C14orf28Q4W4Y0 310 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 AFMIDQ63HM1 303 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 MCOLN2Q8IZK6 566 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 NPWQ8N729 165 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 OR6C4Q8NGE1 309 aa23■■□□□ 1.27
CNEP1R1-209ENST00000567712 PTCD2Q8WV60 388 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms