RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 VIPR1P32241 457 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 CD68P34810 354 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 PAFAH1B1P43034 410 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 CDK18Q07002 472 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 SNX1Q13596 522 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 TEAD4Q15561 434 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 DUOXA1Q1HG43 343 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 TMEM259Q4ZIN3 620 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 NAPEPLDQ6IQ20 393 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 C4orf22Q6V702 233 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 ZCCHC9Q8N567 271 aaKnown RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 FAM174AQ8TBP5 190 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 GRK7Q8WTQ7 553 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 ASB12Q8WXK4 309 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 TADA1Q96BN2 335 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 SCRN2Q96FV2 425 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 C16orf45Q96MC5 204 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 MCCC1Q96RQ3 725 aaPredicted RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 ARRDC1-AS1Q9H2J1 176 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 USP29Q9HBJ7 922 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 PAK5Q9P286 719 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 B4GALT6Q9UBX8 382 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 PILRBQ9UKJ0 227 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 CHKBQ9Y259 395 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 DRG1Q9Y295 367 aaKnown RBP12.23□□□□□ -0.45
SF3B3-208ENST00000567250 PPIL1Q9Y3C6 166 aa12.23□□□□□ -0.45
SF3B3-208ENST00000567250 SCN8AQ9UQD0 1980 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 ERI2A8K979 691 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 C10orf142B7Z368 130 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PRAMEF26H0Y7S4 382 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 BCAT2O15382 392 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SPINT1O43278 529 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 GFRA3O60609 400 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 MAGEC1O60732 1142 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 NDST3O95803 873 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 GAS8O95995 478 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 EPOP01588 193 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 FGF1P05230 155 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PDHA1P08559 390 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 C6P13671 934 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 MAT2AP31153 395 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 AKT2P31751 481 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 FDFT1P37268 417 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PLA2G5P39877 138 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 FNTAP49354 379 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 GDF10P55107 478 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 WNT3AP56704 352 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 RACK1P63244 317 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 CYP1B1Q16678 543 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PARP6Q2NL67 630 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SEL1L3Q68CR1 1132 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PRELID2Q8N945 189 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SPATA22Q8NHS9 363 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 PIH1D2Q8WWB5 315 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 MS4A14Q96JA4 679 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SERAC1Q96JX3 654 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 CAPZA3Q96KX2 299 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 LYSMD1Q96S90 227 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 WRAP53Q9BUR4 548 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 MLPHQ9BV36 600 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 NUSAP1Q9BXS6 441 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 SLC17A9Q9BYT1 436 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 FEZ2Q9UHY8 353 aaPredicted RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
SF3B3-208ENST00000567250 ZFR2Q9UPR6 939 aaKnown RBP12.22□□□□□ -0.45
SF3B3-208ENST00000567250 WDR87Q6ZQQ6 2873 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 NPIPB15A6NHN6 443 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 ANKRD66B4E2M5 251 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 E7EVH7 732 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 F5H423 210 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 KHNYNO15037 678 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 ZNF185O15231 689 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 PSMD3O43242 534 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 LZTS3O60299 673 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 HEXIM1O94992 359 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 PRKCGP05129 697 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 CFIP05156 583 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 MAOBP27338 520 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 LIG3P49916 1009 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 OVGP1Q12889 678 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 RALGDSQ12967 914 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 GALNT3Q14435 633 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 AGERQ15109 404 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 CSRP2Q16527 193 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 TRIM61Q5EBN2 209 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 SLC23A3Q6PIS1 610 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 CCDC137Q6PK04 289 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 KDELC1Q6UW63 502 aa12.21□□□□□ -0.45
SF3B3-208ENST00000567250 RAVER1Q8IY67 606 aaKnown RBP12.21□□□□□ -0.45
SF3B3-208ENST00000567250 CCHCR1Q8TD31 782 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms