RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GPR3P46089 330 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 KIAA1024LP59773 190 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 NME3Q13232 169 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MAP7Q14244 749 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 INPP5JQ15735 1006 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MEA1Q16626 185 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 C8orf34Q49A92 452 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ARHGAP22Q7Z5H3 698 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 TTC7BQ86TV6 843 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 APLFQ8IW19 511 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC34A3Q8N130 599 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 Q8NA96 180 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PLA2G15Q8NCC3 412 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CCDC112Q8NEF3 446 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 OR2AP1Q8NGE2 309 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 OR56A4Q8NGH8 313 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CXorf40AQ8TE69 158 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PDCD6IPQ8WUM4 868 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PATE1Q8WXA2 126 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ARHGEF2Q92974 986 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 SLC35C1Q96A29 364 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MED15Q96RN5 788 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CTRCQ99895 268 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 SPON2Q9BUD6 331 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 WRAP53Q9BUR4 548 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 TRIM55Q9BYV6 548 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 DPEP2Q9H4A9 486 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ATP13A1Q9HD20 1204 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MLXIPLQ9NP71 852 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 FBXO8Q9NRD0 319 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PIGVQ9NUD9 493 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ASNSD1Q9NWL6 643 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 DKK3Q9UBP4 350 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PCDHA7Q9UN72 937 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CNTN6Q9UQ52 1028 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ST14Q9Y5Y6 855 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MTORP42345 2549 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 KRIT1O00522 736 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 TNFRSF10CO14798 259 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 PPM1DO15297 605 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 GRAP2O75791 330 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 DNAJB5O75953 348 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 STK17BO94768 372 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ECEL1O95672 775 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 POP4O95707 220 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 GSRP00390 522 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 FUCA1P04066 466 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 GM2AP17900 193 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ACVRL1P37023 503 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 CXCR3P49682 368 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 GNA12Q03113 381 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 MTM1Q13496 603 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 MYLK3Q32MK0 819 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 DCAF17Q5H9S7 520 aaPredicted RBP7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 BRMS1LQ5PSV4 323 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 TMEM71Q6P5X7 295 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 GDPD4Q6W3E5 623 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 FAM129CQ86XR2 697 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 SPNS2Q8IVW8 549 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ARHGEF19Q8IW93 802 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 CEP57L1Q8IYX8 460 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 NRSN1Q8IZ57 195 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 NAGSQ8N159 534 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 PELI3Q8N2H9 469 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 WDTC1Q8N5D0 677 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ATL2Q8NHH9 583 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 KIAA1524Q8TCG1 905 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 C1orf74Q96LT6 269 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 KREMEN1Q96MU8 473 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 NPY6RQ99463 290 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 TKTL2Q9H0I9 626 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 TRIT1Q9H3H1 467 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 NDFIP2Q9NV92 336 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 POLHQ9Y253 713 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 OAS3Q9Y6K5 1087 aaKnown RBP7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 RPS6KL1Q9Y6S9 549 aa7.76□□□□□ -1.17
HERPUD1-206ENST00000563343 PCNX1Q96RV3 2341 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 POLEQ07864 2286 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 RHPN2P1A8MT19 583 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 HSF2BPO75031 334 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 DAB1O75553 588 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 PCCBP05166 539 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 MYL1P05976 194 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 HOXC4P09017 264 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 EPB41P11171 864 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 CCNB1P14635 433 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 TRIM23P36406 574 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 COPB1P53618 953 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 SNRPD1P62314 119 aaKnown RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 PDCLQ13371 301 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 SEMA5AQ13591 1074 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ERV3-1Q14264 604 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 EFHC1Q5JVL4 640 aa7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 ATXN7L2Q5T6C5 722 aaPredicted RBP7.75□□□□□ -1.17
HERPUD1-206ENST00000563343 TCERG1LQ5VWI1 586 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms