RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 LIG3P49916 1009 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 OTUD4Q01804 1114 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 ITKQ08881 620 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 XRCC4Q13426 336 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 AGERQ15109 404 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 TEAD4Q15561 434 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 SLC45A4Q5BKX6 768 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 PRAMEF14Q5SWL7 426 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 TPRG1LQ5T0D9 272 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 LIPIQ6XZB0 460 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 DBX2Q6ZNG2 339 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 BZW1Q7L1Q6 419 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 ERMP1Q7Z2K6 904 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 IQCHQ86VS3 1027 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 ZSCAN30Q86W11 494 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 SLC22A18ASQ8N1D0 253 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 UBL4BQ8N7F7 174 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 TP53I13Q8NBR0 393 aaPredicted RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 IMP4Q96G21 291 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 TEKT5Q96M29 485 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 AGAP3Q96P47 875 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 MCCC1Q96RQ3 725 aaPredicted RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 TRIB3Q96RU7 358 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 TLR10Q9BXR5 811 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 TDRD1Q9BXT4 1180 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 SLC25A51Q9H1U9 297 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 GAREM1Q9H706 876 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 USP29Q9HBJ7 922 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 GLOD4Q9HC38 313 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 MBNL1Q9NR56 388 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 SEPT10Q9P0V9 454 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 B4GALT6Q9UBX8 382 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 PHTF1Q9UMS5 762 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 R3HDM2Q9Y2K5 976 aaKnown RBP8.59□□□□□ -1.03
UBR1-204ENST00000563239 COQ6Q9Y2Z9 468 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 HS3ST3A1Q9Y663 406 aa8.59□□□□□ -1.03
UBR1-204ENST00000563239 KNL1Q8NG31 2342 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 LRRK1Q38SD2 2015 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 TRPM6Q9BX84 2022 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 BPTFQ12830 3046 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 A0A1W2PQ67 120 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 DCDC2BA2VCK2 349 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 NPIPB15A6NHN6 443 aaPredicted RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 A8MX80 341 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 TJP3O95049 919 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CPP00450 1065 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ALPIP09923 528 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CTPS1P17812 591 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 XPAP23025 273 aaPredicted RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 AKT2P31751 481 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 HNF1BP35680 557 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 IGFALSP35858 605 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ID4P47928 161 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 PFN3P60673 137 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 POLR2LP62875 67 aaKnown RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 FAM193AP78312 1265 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ELP6Q0PNE2 266 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 OVGP1Q12889 678 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 SGCGQ13326 291 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 STAT4Q14765 748 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CNGA3Q16281 694 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CDKN3Q16667 212 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 WSCD2Q2TBF2 565 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CFAP58Q5T655 872 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ARMC12Q5T9G4 340 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ERAP2Q6P179 960 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 IL27RAQ6UWB1 636 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 KYAT3Q6YP21 454 aaKnown RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 PIP4P1Q86T03 277 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 TSPAN33Q86UF1 283 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ZNF567Q8N184 647 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 PELI3Q8N2H9 469 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 DENND6BQ8NEG7 585 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 OR13H1Q8NG92 308 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 SPATA22Q8NHS9 363 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CXorf40AQ8TE69 158 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 PDCD6IPQ8WUM4 868 aaKnown RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 UBE2Q2Q8WVN8 375 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 HTR3CQ8WXA8 447 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 FUBP1Q96AE4 644 aaKnown RBP8.58□□□□□ -1.04
UBR1-204ENST00000563239 SCRN2Q96FV2 425 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 COQ10AQ96MF6 247 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 RBM15Q96T37 977 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBR1-204ENST00000563239 GORASP1Q9BQQ3 440 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 RTKNQ9BST9 563 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 ERVMER34-1Q9H9K5 563 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 CHKBQ9Y259 395 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 TTLL3Q9Y4R7 772 aa8.58□□□□□ -1.04
UBR1-204ENST00000563239 TMEM131Q92545 1883 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 TPRP12270 2363 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 A0A0J9YYE9 177 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 A0A1B0GTQ1 180 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 H7C0C1 242 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 OPHN1O60890 802 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 TM7SF2O76062 418 aa8.57□□□□□ -1.04
UBR1-204ENST00000563239 RECQL5O94762 991 aaPredicted RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 HEXIM1O94992 359 aaKnown RBP8.57□□□□□ -1.04
UBR1-204ENST00000563239 MT-CYBP00156 380 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms