RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 H7C1D1 291 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 PDLIM1O00151 329 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 WRBO00258 174 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CYP27B1O15528 508 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 AP5Z1O43299 807 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CCNDBP1O95273 360 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CRYGCP07315 174 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 NFICP08651 508 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 INSRRP14616 1297 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 IDO1P14902 403 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CTRB1P17538 263 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CALB2P22676 271 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 HSPA13P48723 471 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 LIG4P49917 911 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CAPZA1P52907 286 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 EPHB3P54753 998 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 HNRNPH2P55795 449 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 EIF3BP55884 814 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 SRSF11Q05519 484 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 RASGEF1BQ0VAM2 473 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SMARCB1Q12824 385 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 GAMTQ14353 236 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 EPC2Q52LR7 807 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CFAP157Q5JU67 520 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZNF484Q5JVG2 852 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZBTB37Q5TC79 503 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CTRB2Q6GPI1 263 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 KLHL35Q6PF15 583 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 MSANTD1Q6ZTZ1 278 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 FRMD7Q6ZUT3 714 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 RNF44Q7L0R7 432 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 TMC3Q7Z5M5 1100 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 BIVMQ86UB2 503 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CXorf67Q86X51 503 aaPredicted RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 TOP6BLQ8N6T0 577 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 EHBP1Q8NDI1 1231 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SLC24A4Q8NFF2 622 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ENKURQ8TC29 256 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SCFD1Q8WVM8 642 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SLAMF9Q96A28 289 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CHMP6Q96FZ7 201 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 INTS4Q96HW7 963 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 TPD52L3Q96J77 140 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 FIZ1Q96SL8 496 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 PKP2Q99959 881 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CITED1Q99966 193 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 IKZF4Q9H2S9 585 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SP110Q9HB58 689 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SMURF1Q9HCE7 757 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZNF275Q9NSD4 429 aaPredicted RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 GIMAP4Q9NUV9 329 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 PANK4Q9NVE7 773 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 POLKQ9UBT6 870 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 GGA2Q9UJY4 613 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 FBXW2Q9UKT8 454 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 PCDHA7Q9UN72 937 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ERVK-11Q9UQG0 969 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 LRRC42Q9Y546 428 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ACEP12821 1306 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 RGPD1P0DJD0 1748 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ELOVL7A1L3X0 281 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 TMEM247A6NEH6 219 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SPDYE3A6NKU9 549 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SPECC1L-ADORA2AF8WAN1 911 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 POLRMTO00411 1230 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 FKTNO75072 461 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 MYO1DO94832 1006 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 RASAL1O95294 804 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZCCHC18P0CG32 403 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 HSMCR30P0CW71 290 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CD247P20963 164 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SAT1P21673 171 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SLC15A1P46059 708 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 LMAN1P49257 510 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ARHGDIAP52565 204 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 UCP2P55851 309 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 POLE2P56282 527 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 BCAR1P56945 870 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 COPS2P61201 443 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 YBX1P67809 324 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 CEBPZQ03701 1054 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 KLF10Q13118 480 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 NTRK2Q16620 822 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 IFI16Q16666 785 aaKnown RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZSCAN23Q3MJ62 389 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 SAPCD1Q5SSQ6 148 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 RINT1Q6NUQ1 792 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 BICDL1Q6ZP65 573 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CDKL3Q8IVW4 592 aaPredicted RBP4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZNF366Q8N895 744 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 CCNYQ8ND76 341 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 WDR48Q8TAF3 677 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 TANKQ92844 425 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 GTF3C6Q969F1 213 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 C3orf49Q96BT1 292 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ELP4Q96EB1 424 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 DPYSL5Q9BPU6 564 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 PARD6BQ9BYG5 372 aa4.81□□□□□ -1.64
SMG1-207ENST00000563235 ZC3H12CQ9C0D7 883 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms