RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GABRR2P28476 465 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 NAGLUP54802 743 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 SLC20A2Q08357 652 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 RCN2Q14257 317 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 GALNT7Q86SF2 657 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 FAM13CQ8NE31 585 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 FBXO27Q8NI29 283 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 MAPK15Q8TD08 544 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 ANKRD49Q8WVL7 239 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 SREK1Q8WXA9 508 aaKnown RBP19.19■□□□□ 0.66
SMPD3-203ENST00000563226 BTBD10Q9BSF8 475 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 TUBB6Q9BUF5 446 aa19.19■□□□□ 0.66
SMPD3-203ENST00000563226 H2AFYO75367 372 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 PPM1AP35813 382 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 PTPRRQ15256 657 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TSNAXIP1Q2TAA8 658 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 ZNF549Q6P9A3 640 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TMEM207Q6UWW9 146 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 ITIH5Q86UX2 942 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 PIM3Q86V86 326 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TDRD5Q8NAT2 981 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 MDGA1Q8NFP4 955 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 RMDN1Q96DB5 314 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 ZBED2Q9BTP6 218 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 DRC3Q9H069 523 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 MRPL46Q9H2W6 279 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 STN1Q9H668 368 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 NEMP2A6NFY4 417 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 CD3EAPO15446 510 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 EFCAB14O75071 495 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 GLP2RO95838 553 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 SLC4A1P02730 911 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 CTSAP10619 480 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 GJA1P17302 382 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 ZNF140P52738 457 aaPredicted RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 SLC14A2Q15849 920 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TMC8Q8IU68 726 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TMEM199Q8N511 208 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TXNDC5Q8NBS9 432 aaKnown RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 LPCAT1Q8NF37 534 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 GABPB2Q8TAK5 448 aaPredicted RBP19.18■□□□□ 0.66
SMPD3-203ENST00000563226 NUDCD1Q96RS6 583 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 SHCBP1LQ9BZQ2 653 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 COG4Q9H9E3 785 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 GPAMQ9HCL2 828 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 TAS2R1Q9NYW7 299 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 VWA7Q9Y334 891 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 OR51B4Q9Y5P0 310 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 RAI2Q9Y5P3 530 aa19.18■□□□□ 0.66
SMPD3-203ENST00000563226 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 DIAPH2O60879 1101 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LUC7L3O95232 432 aaKnown RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 WISP3O95389 354 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LATS1O95835 1130 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 CSKP41240 450 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 TRAF2Q12933 501 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 SLC9B1Q4ZJI4 515 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 ARL13AQ5H913 290 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 TECRLQ5HYJ1 363 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LSMEM2Q8N112 164 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 MAB21L3Q8N8X9 362 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 HJURPQ8NCD3 748 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 PEX13Q92968 403 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 MRPL57Q9BQC6 102 aaKnown RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 FEM1AQ9BSK4 669 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LRRC3Q9BY71 257 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LHX3Q9UBR4 397 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 APOBEC2Q9Y235 224 aaKnown RBP19.17■□□□□ 0.66
SMPD3-203ENST00000563226 LAMA3Q16787 3333 aa19.17■□□□□ 0.66
SMPD3-203ENST00000563226 PIGNO95427 931 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 ATP5BP06576 529 aaKnown RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 CCDC166P0CW27 439 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 KCNA5P22460 613 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 TMC7Q7Z402 723 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 GLT6D1Q7Z4J2 308 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 SUGP1Q8IWZ8 645 aaKnown RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 OR4L1Q8NH43 312 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 TTC8Q8TAM2 541 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 AGAP11Q8TF27 550 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 ARMC5Q96C12 935 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 TMA16Q96EY4 203 aaKnown RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 CDKN2AIPNLQ96HQ2 116 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 MAN1C1Q9NR34 630 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 VPS51Q9UID3 782 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 VPS28Q9UK41 221 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 FCF1Q9Y324 198 aaKnown RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 A0A0U1RQS6 177 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 GSC2O15499 205 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 SLC8A1P32418 973 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 TIAL1Q01085 375 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 KDSRQ06136 332 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 PABPC1LQ4VXU2 614 aaKnown RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 FBXO46Q6PJ61 603 aaPredicted RBP19.16■□□□□ 0.66
SMPD3-203ENST00000563226 EPGNQ6UW88 154 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 LMNTD2Q8IXW0 634 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 KLHL23Q8NBE8 558 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 OR4K2Q8NGD2 314 aa19.16■□□□□ 0.66
SMPD3-203ENST00000563226 GPR150Q8NGU9 434 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms