RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GPAT4Q86UL3 456 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 LURAP1LQ8IV03 231 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CADM3Q8N126 398 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 TEX45Q8NA69 505 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CEP76Q8TAP6 659 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SCFD2Q8WU76 684 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 ATOH1Q92858 354 aaPredicted RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SMARCE1Q969G3 411 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 RNF183Q96D59 192 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 MARK4Q96L34 752 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CMTM3Q96MX0 182 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 ISCUQ9H1K1 167 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SMARCAD1Q9H4L7 1026 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 MVB12BQ9H7P6 319 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 C20orf141Q9NUB4 165 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 SPATS2LQ9NUQ6 558 aaKnown RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 NFKBIL1Q9UBC1 381 aaPredicted RBP3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 LRP12Q9Y561 859 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 CAPN7Q9Y6W3 813 aa3.39□□□□□ -1.87
SHCBP1-202ENST00000563219 AGAP14A8MT82 685 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 EIF3CLB5ME19 914 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 LIASO43766 372 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 PLOD3O60568 738 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 CCNDBP1O95273 360 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SYF2O95926 243 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 KRT10P13645 584 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 HOXB2P14652 356 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC2A4P14672 509 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 ZNF8P17098 575 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 MCM3P25205 808 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 FMO4P31512 558 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 BSGP35613 385 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 GARSP41250 739 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 PPP3CCP48454 512 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 CDH12P55289 794 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TMPRSS3P57727 454 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 ZP1P60852 638 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 IFI35P80217 286 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 RUNX2Q13950 521 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 VEPH1Q14D04 833 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 PPP2R5BQ15173 497 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TAF11Q15544 211 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 COL28A1Q2UY09 1125 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 DUSP28Q4G0W2 176 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 BMP2KLQ5H9B9 411 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 GKAP1Q5VSY0 366 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 KLHL35Q6PF15 583 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TSSK4Q6SA08 328 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 FAM47EQ6ZV65 393 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC46A3Q7Z3Q1 461 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 DENND6AQ8IWF6 608 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM199Q8N511 208 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 ZBTB8BQ8NAP8 495 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM116Q8NCL8 245 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 CCDC191Q8NCU4 936 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 C7orf57Q8NEG2 295 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 RASSF8Q8NHQ8 419 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SLC35F5Q8WV83 523 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM18Q96B42 140 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 NSUN4Q96CB9 384 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 RADILQ96JH8 1075 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 MSTO1Q9BUK6 570 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 MAK16Q9BXY0 300 aaKnown RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 GLIS2Q9BZE0 524 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 MUC13Q9H3R2 512 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 KAT14Q9H8E8 782 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SCPEP1Q9HB40 452 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 KRCC1Q9NPI7 259 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 HCFC1R1Q9NWW0 138 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 ANKRD10Q9NXR5 420 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 CHORDC1Q9UHD1 332 aaPredicted RBP3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM5Q9Y2B1 443 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 SNX8Q9Y5X2 465 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 LYVE1Q9Y5Y7 322 aa3.38□□□□□ -1.87
SHCBP1-202ENST00000563219 LIPT2A6NK58 231 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 MYO1GB0I1T2 1018 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 B4DGG1 531 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 H0YGN5 161 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LDB2O43679 373 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 TSPAN9O75954 239 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SEC14L2O76054 403 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SOX30O94993 753 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LCATP04180 440 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 ALPLP05186 524 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 SRD5A1P18405 259 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 EIF2DP41214 584 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 GABRB2P47870 512 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 CXCR3P49682 368 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 GNAQP50148 359 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 P2RX3P56373 397 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 RPL7AP62424 266 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 OLR1P78380 273 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 POU5F1Q01860 360 aaKnown RBP3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 LPIN1Q14693 890 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 RASA2Q15283 850 aa3.37□□□□□ -1.87
SHCBP1-202ENST00000563219 TMEM266Q2M3C6 531 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms