RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
AC055717.2-201ENST00000561864 DNAH12Q6ZR08 3092 aa12.7□□□□□ -0.38
AC055717.2-201ENST00000561864 TRAV19A0A0A6YYK7 116 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CXorf51AA0A1B0GTR3 108 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CAPN14A8MX76 684 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 SLCO1B7G3V0H7 640 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 AURKAO14965 403 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CD3EAPO15446 510 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 NPHS1O60500 1241 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 ATP6V1G2O95670 118 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 FGF19O95750 216 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 GOT2P00505 430 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 LTA4HP09960 611 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 SBK3P0C264 359 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 LINC00271P0C7V0 271 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 ESRRAP11474 423 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 ATP5F1P24539 256 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 GABRR2P28476 465 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 ARRB2P32121 409 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 SCNN1BP51168 640 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 AP1S1P61966 158 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 TUBB3Q13509 450 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CDH18Q13634 790 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 TYSND1Q2T9J0 566 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 MPP7Q5T2T1 576 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 TXNDC8Q6A555 127 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 NCEH1Q6PIU2 408 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 NAPRTQ6XQN6 538 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 GLT6D1Q7Z4J2 308 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 METTL3Q86U44 580 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 OR4L1Q8NH43 312 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 NXNL1Q96CM4 212 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 TMA16Q96EY4 203 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 OLFM1Q99784 485 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 EMILIN2Q9BXX0 1053 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 PNPOQ9NVS9 261 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CPSF2Q9P2I0 782 aaKnown RBP12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 VPS28Q9UK41 221 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 LZTS1Q9Y250 596 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 VPS9D1Q9Y2B5 631 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 VWA7Q9Y334 891 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 SH3BP1Q9Y3L3 701 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 RAP2CQ9Y3L5 183 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 OR51B4Q9Y5P0 310 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 RAI2Q9Y5P3 530 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 ARL5AQ9Y689 179 aa12.69□□□□□ -0.38
AC055717.2-201ENST00000561864 CENPFP49454 3210 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 C2orf81A6NN90 581 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 ZBBXA8MT70 800 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 ZNF195O14628 629 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 DLX3O60479 287 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CKMP06732 381 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 C8AP07357 584 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 RBP1P09455 135 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 FDXRP22570 491 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CA8P35219 290 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CSKP41240 450 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 MAPK8P45983 427 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 GRIA4P48058 902 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 GLRBP48167 497 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 IDH3AP50213 366 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 SUOXP51687 545 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CYP4F8P98187 520 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 PFKPQ01813 784 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 DLG1Q12959 904 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 ZNF460Q14592 562 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 MPPE1Q53F39 396 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TECRLQ5HYJ1 363 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 RTL10Q7L3V2 364 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 OTOP2Q7RTS6 562 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 PIWIL4Q7Z3Z4 852 aaKnown RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TTC7BQ86TV6 843 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 SUGP1Q8IWZ8 645 aaKnown RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TDRD5Q8NAT2 981 aaKnown RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 KREMEN2Q8NCW0 462 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 HEXDCQ8WVB3 486 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 RMDN1Q96DB5 314 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 PRR11Q96HE9 360 aaPredicted RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 UBXN10Q96LJ8 280 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TBATAQ96M53 351 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CYP2S1Q96SQ9 504 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TCF12Q99081 682 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 NDNQ99608 321 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 BTBD10Q9BSF8 475 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 FEM1AQ9BSK4 669 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 C2orf49Q9BVC5 232 aaPredicted RBP12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 CCDC106Q9BWC9 280 aa12.68□□□□□ -0.38
AC055717.2-201ENST00000561864 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms