RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 JCHAINP01591 159 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 CYP2A6P11509 494 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 CTPS1P17812 591 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 CES1P23141 567 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 DGKAP23743 735 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 PFN3P60673 137 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 YPEL5P62699 121 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 ARHGEF7Q14155 803 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 FZD2Q14332 565 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 INPP5AQ14642 412 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 FAXCQ5TGI0 409 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 SPOCD1Q6ZMY3 1216 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 GLRX5Q86SX6 157 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 TXLNBQ8N3L3 684 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 TP53I13Q8NBR0 393 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 TPCN2Q8NHX9 752 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 MAML1Q92585 1016 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 CEP41Q9BYV8 373 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 UCKL1Q9NWZ5 548 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 B4GALT6Q9UBX8 382 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 PHTF1Q9UMS5 762 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 DUSP10Q9Y6W6 482 aa13.03□□□□□ -0.32
CTDSPL2-209ENST00000560620 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 NEMP2A6NFY4 417 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 TOR1BO14657 336 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 PIAS2O75928 621 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 PGLSO95336 258 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 HLA-DQB2P05538 268 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 ALPPL2P10696 532 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 JUNDP17535 347 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 FECHP22830 423 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 HTR1BP28222 390 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 VIPR1P32241 457 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CDKN2BP42772 138 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 VAV2P52735 878 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 SHC2P98077 582 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 DAB2P98082 770 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 KIF5AQ12840 1032 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 RALGDSQ12967 914 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 DNAJC3Q13217 504 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 WSCD2Q2TBF2 565 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CCDC181Q5TID7 509 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 SLCO6A1Q86UG4 719 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 LMX1AQ8TE12 382 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 P3H4Q92791 437 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 FATE1Q969F0 183 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 IFT43Q96FT9 208 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CALR3Q96L12 384 aaKnown RBP13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 AGAP3Q96P47 875 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 DESI2Q9BSY9 194 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 SLC13A1Q9BZW2 595 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 SAE1Q9UBE0 346 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 SALL4Q9UJQ4 1053 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 CHKBQ9Y259 395 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 OR1A2Q9Y585 309 aa13.02□□□□□ -0.33
CTDSPL2-209ENST00000560620 LRRK1Q38SD2 2015 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 CSF2P04141 144 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 PDHA1P08559 390 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 ALPIP09923 528 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 CD86P42081 329 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 NR2C2P49116 596 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 PPARDQ03181 441 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZBTB17Q13105 803 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 ENPP7Q6UWV6 458 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZC3H18Q86VM9 953 aaKnown RBP13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 KATNAL2Q8IYT4 538 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 SLC25A45Q8N413 288 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 PLA2G15Q8NCC3 412 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 LPCAT1Q8NF37 534 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 BTN2A2Q8WVV5 523 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 ADAMTS14Q8WXS8 1223 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 KRT35Q92764 455 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 HAUS1Q96CS2 278 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 NUS1Q96E22 293 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 SCRN2Q96FV2 425 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 APOOQ9BUR5 198 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms