RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 FAM72DQ6L9T8 149 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 FAM72BQ86X60 149 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 ZNF354CQ86Y25 554 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 ART4Q93070 314 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 FUBP1Q96AE4 644 aaKnown RBP16.71■□□□□ 0.27
HERC1-207ENST00000560316 C18orf8Q96DM3 657 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 CATSPER2Q96P56 530 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 TMEM248Q9NWD8 314 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 PCDHGA3Q9Y5H0 932 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 ICE1Q9Y2F5 2266 aa16.71■□□□□ 0.27
HERC1-207ENST00000560316 SPTBN1Q01082 2364 aaKnown RBP16.71■□□□□ 0.26
HERC1-207ENST00000560316 SPENQ96T58 3664 aaKnown RBP16.71■□□□□ 0.26
HERC1-207ENST00000560316 HGSO14964 777 aaPredicted RBP16.7■□□□□ 0.26
HERC1-207ENST00000560316 RAMP2O60895 175 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 SCNN1AP37088 669 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 PPP1R2P41236 205 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 GABRB2P47870 512 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 RHOAP61586 193 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 ATP11AP98196 1134 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 UGP2Q16851 508 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 MIB2Q96AX9 1013 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 ABHD17AQ96GS6 310 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 EXOC2Q96KP1 924 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 CYP4F12Q9HCS2 524 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
HERC1-207ENST00000560316 TMEM51Q9NW97 253 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 MOSPD1Q9UJG1 213 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 NEU3Q9UQ49 428 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 MFHAS1Q9Y4C4 1052 aa16.7■□□□□ 0.26
HERC1-207ENST00000560316 ARHGEF17Q96PE2 2063 aaPredicted RBP16.69■□□□□ 0.26
HERC1-207ENST00000560316 RHPN2P1A8MT19 583 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 CACNB4O00305 520 aaPredicted RBP16.69■□□□□ 0.26
HERC1-207ENST00000560316 FOXN3O00409 490 aaPredicted RBP16.69■□□□□ 0.26
HERC1-207ENST00000560316 MTSS1O43312 755 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 RAD1O60671 282 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 MPSTP25325 297 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 CD1CP29017 333 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 SUOXP51687 545 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 AGERQ15109 404 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 NKAIN2Q5VXU1 208 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 GBP6Q6ZN66 633 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 CREBRFQ8IUR6 639 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 EMC1Q8N766 993 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 NCAPGQ9BPX3 1015 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 PDCL3Q9H2J4 239 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 SUDS3Q9H7L9 328 aaPredicted RBP16.69■□□□□ 0.26
HERC1-207ENST00000560316 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 TMEM59LQ9UK28 342 aa16.69■□□□□ 0.26
HERC1-207ENST00000560316 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
HERC1-207ENST00000560316 LRIG2O94898 1065 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 PON1P27169 355 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ADRA1BP35368 520 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 MMP12P39900 470 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 LIMK2P53671 638 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 NRG1Q02297 640 aaPredicted RBP16.68■□□□□ 0.26
HERC1-207ENST00000560316 CDO1Q16878 200 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ERAP2Q6P179 960 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ZNF438Q7Z4V0 828 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ZSWIM9Q86XI8 627 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 KIAA1524Q8TCG1 905 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ZDHHC1Q8WTX9 485 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 SLC45A3Q96JT2 553 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 DDA1Q9BW61 102 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 LGR4Q9BXB1 951 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 SUV39H2Q9H5I1 410 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 NOL6Q9H6R4 1146 aaKnown RBP16.68■□□□□ 0.26
HERC1-207ENST00000560316 OCIAD1Q9NX40 245 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 LHX3Q9UBR4 397 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 DACH1Q9UI36 760 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 DNAJC12Q9UKB3 198 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
HERC1-207ENST00000560316 TSPAN11A1L157 253 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 TNFRSF10CO14798 259 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 RECQL5O94762 991 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 FGF1P05230 155 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 CDH5P33151 784 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 CDC20Q12834 499 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 PAK1Q13153 545 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 C15orf59Q2T9L4 293 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 DEFB109BQ30KR1 87 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 C17orf82Q86X59 251 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 NRROSQ86YC3 692 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 UNC5BQ8IZJ1 945 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 AGBL5Q8NDL9 886 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 TBC1D31Q96DN5 1066 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 RETREG1Q9H6L5 497 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 GPN2Q9H9Y4 310 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 TMEM9Q9P0T7 183 aa16.67■□□□□ 0.26
HERC1-207ENST00000560316 PLEKHB1Q9UF11 243 aaPredicted RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
HERC1-207ENST00000560316 CREBBPQ92793 2442 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 PRSS38A1L453 326 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 PRR19A6NJB7 356 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms