RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SLF1Q9BQI6 1058 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 TRMOQ9BU70 441 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 IFIH1Q9BYX4 1025 aaKnown RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 GLIS2Q9BZE0 524 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 KLHL31Q9H511 634 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 AAMDCQ9H7C9 122 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 MVB12BQ9H7P6 319 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 POLR1BQ9H9Y6 1135 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 NRIP3Q9NQ35 241 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 SUCLA2Q9P2R7 463 aaPredicted RBP4.57□□□□□ -1.68
CASC4-206ENST00000558847 CTNNAL1Q9UBT7 734 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 MAU2Q9Y6X3 613 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 A3GALT2U3KPV4 340 aa4.57□□□□□ -1.68
CASC4-206ENST00000558847 ZMYM2Q9UBW7 1377 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 LOC100509620A0A075B734 347 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 E5RJQ4 531 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 PROB1E7EW31 1015 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 MDM4O15151 490 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 HS6ST1O60243 411 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 ZC3H11AO75152 810 aaKnown RBP eCLIP4.56□□□□□ -1.68
CASC4-206ENST00000558847 BEST1O76090 585 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 OR2C1O95371 312 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 IFNA2P01563 188 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 SRPRAP08240 638 aaKnown RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 MMP2P08253 660 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 ETFAP13804 333 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 AGAP20933 346 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 GPTP24298 496 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 GCH1P30793 250 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 GARSP41250 739 aaKnown RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 ALDH7A1P49419 539 aaKnown RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 CLCN5P51795 746 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 RAD23BP54727 409 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 CEBPZQ03701 1054 aaKnown RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 ACSM2AQ08AH3 577 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 LPIN1Q14693 890 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 NAB2Q15742 525 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 C15orf59Q2T9L4 293 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 SOWAHCQ53LP3 525 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 ACSM2BQ68CK6 577 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 NAA16Q6N069 864 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 SLC18B1Q6NT16 456 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 SLC30A6Q6NXT4 461 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 TRILQ7L0X0 811 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 PALB2Q86YC2 1186 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 TDRPQ86YL5 185 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 EPHX4Q8IUS5 362 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 TMTC2Q8N394 836 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 KDM1BQ8NB78 822 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 SCCPDHQ8NBX0 429 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 EME1Q96AY2 570 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 TMEM18Q96B42 140 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 ZNF778Q96MU6 729 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 TMEM47Q9BQJ4 181 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 PDZD7Q9H5P4 517 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 MAGEE1Q9HCI5 957 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 RANGRFQ9HD47 186 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 FZD3Q9NPG1 666 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 GIMAP4Q9NUV9 329 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 OGFRQ9NZT2 677 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 MRPL15Q9P015 296 aaKnown RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 CFDP1Q9UEE9 299 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 PLEKHB1Q9UF11 243 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 PCDHGB4Q9UN71 923 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 ERVK-11Q9UQG0 969 aa4.56□□□□□ -1.68
CASC4-206ENST00000558847 COL3A1P02461 1466 aaPredicted RBP4.56□□□□□ -1.68
CASC4-206ENST00000558847 FAM237AA0A1B0GTK4 181 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 A0A1W2PQ09 198 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 WDR91A4D1P6 747 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 AKR1B15C9JRZ8 316 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 STMND1H3BQB6 276 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 SNAP23O00161 211 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 CHL1O00533 1208 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 TP73O15350 636 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 P4HA2O15460 535 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 NKX2-2O95096 273 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 DDX5P17844 614 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 DCTDP32321 178 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 ARHGAP25P42331 645 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 RASSF2P50749 326 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 BECN1Q14457 450 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 INPP5JQ15735 1006 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 SRSF7Q16629 238 aaKnown RBP eCLIP4.55□□□□□ -1.68
CASC4-206ENST00000558847 ALG11Q2TAA5 492 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 ESCO2Q56NI9 601 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 LCTLQ6UWM7 567 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 ADGRA1Q86SQ6 560 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 TEX45Q8NA69 505 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 CEP76Q8TAP6 659 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 PABPC5Q96DU9 382 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 SAT2Q96F10 170 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 ZNF570Q96NI8 536 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 WDFY2Q96P53 400 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 GFM1Q96RP9 751 aaKnown RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 SEPT5Q99719 369 aaPredicted RBP4.55□□□□□ -1.68
CASC4-206ENST00000558847 FAM110AQ9BQ89 295 aa4.55□□□□□ -1.68
CASC4-206ENST00000558847 MXD3Q9BW11 206 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms